Multi-omics approaches to disease

Keywords

Genome Biology, Biology, Human genetics, Omics, Computational biology

References

• Genetics Meets Metabolomics: A Genome-Wide Association Study of Metabolite Profiles in Human SerumFrancisco Giner Abati — 2008
• Epigenome-wide association of liver methylation patterns and complex metabolic traits in miceHepi Ari P, Heru Enggar T — 2015
• Gene-environment interactions and epigenetic basis of human diseases.Liang Liu, Yuanyuan Li, Trygve O. Tollefsbol — 2008
• RNA-seq Data: Challenges in and Recommendations for Experimental Design and AnalysisAlexander Williams, Sean Thomas, Stacia K. Wyman — 2014
• Unraveling the environmental and genetic interactions in atherosclerosis: Central role of the gut microbiotaElin Org, Margarete Mehrabian, Aldons J. Lusis — 2015
• The Genotype-Tissue Expression (GTEx) projectJohn T. Lonsdale, Jeffrey A. Thomas, Mike Salvatore — 2013
• FTO Obesity Variant Circuitry and Adipocyte Browning in HumansMelina Claussnitzer, Simon N. Dankel, Kyoung-Han Kim — 2015
• Single-cell messenger RNA sequencing reveals rare intestinal cell typesDominic Grün, Anna Lyubimova, Lennart Kester — 2015
• Networks: An IntroductionMark Newman — 2010
• How data analysis affects power, reproducibility and biological insight of RNA-seq studies in complex datasetsLucı́a Peixoto, Davide Risso, Shane G. Poplawski — 2015
• Eigengene networks for studying the relationships between co-expression modulesPeter Langfelder, Steve Horvath — 2007
• Genetic Control of Obesity and Gut Microbiota Composition in Response to High-Fat, High-Sucrose Diet in MiceBrian W. Parks, Elizabeth Nam, Elin Org — 2013
• The landscape of genetic complexity across 5,700 gene expression traits in yeast.Rachel B. Brem, Leonid Kruglyak — 2005
• Mass spectrometry-based metabolomics.Katja Dettmer, Pavel A. Aronov, Bruce D. Hammock — 2007
• The Architecture of Gene Regulatory Variation across Multiple Human Tissues: The MuTHER StudyAlexandra C. Nica, Leopold Parts, Daniel Glass — 2011
• Integrating Genetic and Network Analysis to Characterize Genes Related to Mouse WeightAnatole Ghazalpour, Sudheer Doss, Bin Zhang — 2006
• Targeted Capture and Massively Parallel Sequencing of Twelve Human ExomesSarah Ng, Emily H. Turner, Peggy D. Robertson — 2009
• DNA methylation age of human tissues and cell typesSteve Horvath — 2013
• A large-scale method to measure absolute protein phosphorylation stoichiometriesRonghu Wu, Wilhelm Haas, Noah Dephoure — 2011
• JOINT ANALYSIS OF SNP AND GENE EXPRESSION DATA IN GENETIC ASSOCIATION STUDIES OF COMPLEX DISEASESYen-Tsung Huang, Tyler J. VanderWeele, Xihong Lin — 2014

Cited by

• Metabolomics study of the hepatoprotective effect of Phellinus igniarius in chronic ethanol-induced liver injury mice using UPLC-Q/TOF-MS combined with ingenuity pathway analysis.Francisco J. Aute — 2020
• A Primer on Data Analytics in Functional Genomics: How to Move from Data to Insight?Joseph Barnes, Nancy Lough — 2019
• Multiomics-based strategies for taming intestinal inflammation in the neonateNaëmi Leo, Dennis Meier, R. V. Pisarev — 2019
• Big science and big data in nephrology.高淑 山村 — 2019
• Bardet-Biedl syndromeEmad Badawy, Zainab Harb — 2013
• The transformative potential of an integrative approach to pregnancy.Haley Eidem, Kriston L. McGary, John A. Capra — 2017
• Mass-spectrometry-based lipidomics.Ting Hu, Jinlan Zhang — 2018
• Precision Oncology: The Promise of Big Data and the Legacy of Small DataEnrico Capobianco — 2017
• Using omics to explore complications of kidney transplantationCaragh P. Stapleton, Peter J. Conlon, Paul J. Phelan — 2018
• Mini-Review: The Contribution of Intermediate Phenotypes to GxE Effects on Disorders of Body Composition in the New OMICS EraEdna J. Nava‐González, Esther C. Gallegos-Cabriales, Irene Leal‐Berumen — 2017
• Mediterranean Diet and Multi-Ingredient-Based Interventions for the Management of Non-Alcoholic Fatty Liver DiseaseManuel Suárez, Noemí Boqué, Josep M Del Bas-Prior — 2017
• Multi-omics analysis reveals that ornithine decarboxylase contributes to erlotinib resistance in pancreatic cancer cellsWon‐Jun Jang, Boyeon Choi, Sang-Hoon Song — 2017
• Can we Understand the Pathobiology of Bronchopulmonary Dysplasia??Cristina M. Alvira, Rory E. Morty — 2017
• Gender-related metabolomics and lipidomics: From experimental animal models to clinical evidence.Matteo Audano, Mariateresa Maldini, Emma De Fabiani — 2017
• Integrative Analysis of Proteomics Data to Obtain Clinically Relevant Markers.Nathan Salomonis — 2018
• Comparative transcriptomic analysis of human placentae at term and preterm deliveryAlison G. Paquette, Heather Brockway, Nathan D. Price — 2017
• Voluntary Exposure to a Toxin: the Genetic Influence on Ethanol ConsumptionPaula L. Hoffman, Laura Saba, Lauren A. Vanderlinden — 2017
• Brief guide to the analysis, interpretation and presentation of microbiota dataStefan Zalewski, Christopher J. Stewart, Nicholas D. Embleton — 2017
• Biological Systems as Heterogeneous Information Networks: A Mini-review and PerspectivesKoki Tsuyuzaki, Itoshi Nikaido — 2017
• Food allergy and omics.Gopal Krishna Dhondalay, Efren Rael, Swati Acharya — 2018

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