Brief guide to the analysis, interpretation and presentation of microbiota data
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Summary
An overview of terminology and data generation is provided, and one of the study data sets is used to demonstrate different presentations of those data.
- Type
- article
- Published
- 2017-11-30
- Cited by
- 3
- References
- 22
- Access
- Open access
- OpenAlex
- https://openalex.org/W2775023903
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:44599982
Keywords
Biology, Metagenomics, Computational biology, Phylum, Operational taxonomic unit
References
- Heterogeneity of the gut microbiome in mice: guidelines for optimizing experimental design
- Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service.
- Experimental and analytical tools for studying the human microbiome
- Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories
- Solving the Problem: Genome Annotation Standards before the Data Deluge
- Bacterial and fungal viability in the preterm gut: NEC and sepsis
- Gut microbiota composition and development of atopic manifestations in infancy: the KOALA Birth Cohort Study
- Routine Use of Probiotics in Preterm Infants: Longitudinal Impact on the Microbiome and Metabolome
- Gut bacteria dysbiosis and necrotising enterocolitis in very low birthweight infants: a prospective case-control study
- Metataxonomic and Metagenomic Approaches vs. Culture-Based Techniques for Clinical Pathology
- Microbiome: Should we diversify from diversity?
- Temporal bacterial and metabolic development of the preterm gut reveals specific signatures in health and disease
- Microbes and mental health: A review.
- What is the microbiome?
- What is broad-range 16S rDNA PCR?
- Multi-omics approaches to disease
- Cesarean or Vaginal Birth Does Not Impact the Longitudinal Development of the Gut Microbiome in a Cohort of Exclusively Preterm Infants
- Longitudinal development of the gut microbiome and metabolome in preterm neonates with late onset sepsis and healthy controls
Cited by
- Estudi de diferents moduladors de la microbiota i el seu efecte sobre la colitis ulcerosa i la diversitat microbiana
- Lactoferrin impact on gut microbiota in preterm infants with late-onset sepsis or necrotising enterocolitis: the MAGPIE mechanisms of action study
- Reveal your microbes, and i’ll reveal your origins: geographical traceability via Scomber colias intestinal tract metagenomics
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