The mammalian epigenome.

Keywords

Biology, Epigenome, Computational biology, Genetics, Evolutionary biology

References

• Loss of genomic methylation causes p53-dependent apoptosis and epigenetic deregulationLaurie Jackson‐Grusby, Caroline Beard, Richard Possemato — 2001
• The fundamental role of epigenetic events in cancerPeter A. Jones, Stephen B. Baylin — 2002
• CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locusAmy T. Hark, Christopher J. Schoenherr, David J. Katz — 2000
• Epigenetic Reprogramming in Mammalian DevelopmentWolf Reik, Wendy Dean, Jörn Walter — 2001
• Evidence for an instructive mechanism of de novo methylation in cancer cellsIlana Keshet, Yeshayahu Schlesinger, S. Farkash — 2006
• A bivalent chromatin structure marks key developmental genes in embryonic stem cells.B Bernstein, Tarjei S. Mikkelsen, Xiaohui Xie — 2006
• A blueprint for a Human Epigenome Project: the AACR Human Epigenome Workshop.Peter A. Jones, Robert A. Martienssen — 2005
• A physical map of the human genomeJohn D. McPherson, Marco A. Marra, LaDeana Hillier — 2001
• DNA Methylation Profiling of the Human Major Histocompatibility Complex: A Pilot Study for the Human Epigenome ProjectVardhman K. Rakyan, Thomas Hildmann, Karen Novik — 2004
• Antigen receptor loci poised for V(D)J rearrangement are broadly associated with BRG1 and flanked by peaks of histone H3 dimethylated at lysine 4Katrina B. Morshead, David Ciccone, Sean D. Taverna — 2003
• The genomic landscape of histone modifications in human T cellsTae‐Young Roh, Suresh Cuddapah, Kairong Cui — 2006
• Genome-wide analysis of Polycomb targets in Drosophila melanogasterYuri B. Schwartz, Tatyana G. Kahn, David A. Nix — 2006
• Transposon-free regions in mammalian genomes.Cas Simons, Michael Pheasant, Igor V. Makunin — 2005
• Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells.Eran Meshorer, Dhananjay Yellajoshula, Eric M. George — 2006
• Epigenome analyses using BAC microarrays identify evolutionary conservation of tissue-specific methylation of SHANK3Tsui‐Ting Ching, Alika K. Maunakea, Peter Jun — 2005
• The MT domain of the proto-oncoprotein MLL binds to CpG-containing DNA and discriminates against methylation.Marco T. Birke — 2002
• Global and Hox-specific roles for the MLL1 methyltransferase.Matthew G. Guenther, Richard G. Jenner, B. Chevalier — 2005
• Highly parallel genomic assaysJian‐Bing Fan, Mark S. Chee, Kevin L. Gunderson — 2006
• Accurate Multiplex Polony Sequencing of an Evolved Bacterial GenomeJay Shendure, Gregory J. Porreca, Nikos B. Reppas — 2005
• Distinct epigenetic changes in the stromal cells of breast cancersMin Hu, Jun Yao, Li Cai — 2005

Cited by

• Translational control of gene expression from transcripts to transcriptomes.Daniel H. Lackner, Jürg Bähler — 2008
• PR-Set7 Establishes a Repressive trans-Tail Histone Code That Regulates DifferentiationCesare Pinelli — 2008
• Inferring causal relationships among different histone modifications and gene expression.Sidney Douglas Engle — 2008
• BRG1 requirement for long-range interaction of a locus control region with a downstream promoter陆伟, 严彪, 李志国 — 2009
• A novel mechanism of epigenetic regulation: nucleosome-space occupancy.C Blum, Urooj A. Mirza, Mirjam Christ‐Crain — 2010
• Methylation analysis by DNA immunoprecipitationИ Н Бесалиев, М. Ф. Тухфатуллин — 2009
• Integrating post‐transcriptional regulation into the embryonic stem cell gene regulatory networkPongsak Holimchayachotikul, Komgrit Leksakul, Daniela Rita Montella — 2012
• Expression pattern of class I histone deacetylases in vulvar intraepithelial neoplasia and vulvar cancer: a tissue microarray studyG.Kportufe Agama — 2011
• Emerging promise of epigenetics and DNA methylation for the diagnosis and management of women's cancers.Marielle Ernould-Gandouet — 2010
• Targeted DNA Methylation Analysis by High Throughput Sequencing in Porcine Peri-attachment EmbryosVicente Clemente — 2013
• DNA-methylation effect on cotranscriptional splicing is dependent on GC architecture of the exon–intron structureВалерій Миколайович Власенко, Валерий Николаевич Власенко, Valerii Mykolaiovych Vlasenko — 2013
• A wavelet-based method to exploit epigenomic language in the regulatory regionF.J. Kabot, D.L. Ziegler — 2014
• The impact of genomics on oncology nursing.V. I. Turinov — 2013
• Therapeutic potential of histone deacetylase inhibitors in pancreatic cancer.幸一 叶 — 2014
• 9H-Purine Scaffold Reveals Induced-Fit Pocket Plasticity of the BRD9 BromodomainJosé de Ribamar de Sousa Rocha, Edílson Páscoa Rodrigues, Hamanda Soares Viana Pereira da Silva — 2015
• Cytochrome P450 1A1 and 1B1 promoter CpG island methylation regulates rat liver injury induced by isoniazidLeszek Pacholski — 2017
• Fast detection of differential chromatin domains with SCIDDOTore Modeen — 2018
• THE LINKAGE BETWEEN TRANSCRIPTION CONTROL AND EPIGENETIC REGULATION: THE SNAIL STORY AND BEYONDYiwei Lin — 2012
• Post-zygotic Genetic Variation in Health and DiseaseHamid Reza Razzaghian — 2013
• Methylation of histone H3 lysine 27 associated with apoptosis in osteosarcoma cells induced by staurosporine.Ming‐Fang Cheng, Chian-Her Lee, Kan-Tai Hsia — 2009

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