Molecular mechanisms of long noncoding RNAs

Keywords

Biology, Computational biology, Long non-coding RNA, Non-coding RNA, Genetics

References

• RNA meets chromatin.Natalia Guerrero Maldonado — 2005
• RNA regulation: a new genetics?John S. Mattick — 2004
• Extensive and coordinated transcription of noncoding RNAs within cell cycle promotersTiffany Hung, Yulei Wang, Michael F. Lin — 2011
• Yeast telomerase RNA: a flexible scaffold for protein subunits.David C. Zappulla, Thomas R. Cech — 2004
• Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cellsSabine Loewer, Moran N. Cabili, Mitchell Guttman — 2010
• Regulation of gene expression by alternative promotersTorik Ayoubi, Wim J. M. Van De Yen — 1996
• Roles for RNA in telomerase nucleotide and repeat addition processivity.Cary Lai, M. Clarke Miller, Kathleen Collins — 2003
• Polycomb-dependent regulatory contacts between distant Hox loci in Drosophila.Frédéric Bantignies, Virginie Roure, Itys Comet — 2011
• A coding-independent function of gene and pseudogene mRNAs regulates tumour biologyLaura Poliseno, Leonardo Salmena, Jiangwen Zhang — 2010
• Template boundary definition in mammalian telomerase.Jiunn-Liang Chen, Carol W. Greider — 2003
• Polycomb proteins targeted by a short repeat RNA to the mouse X-chromosomeJing Zhao, Bryan K. Sun, Jennifer A. Erwin — 2008
• Long noncoding RNAs: functional surprises from the RNA world.Jeremy E. Wilusz, Hongjae Sunwoo, David L. Spector — 2009
• Regulatory roles of natural antisense transcriptsMohammad Ali Faghihi, Claes Wahlestedt — 2009
• Regulation of the mammalian epigenome by long noncoding RNAs.Joanne Whitehead, Gaurav Kumar Pandey, Chandrasekhar Kanduri — 2009
• The impact of microRNAs on protein outputDaehyun Baek, Judit Villén, Chanseok Shin — 2008
• SUMOylation promotes de novo targeting of HP1α to pericentric heterochromatinChristèle Maison, Delphine Bailly, Danièle Roche — 2011
• Maternal-specific methylation of the imprinted mouse Igf2r locus identifies the expressed locus as carrying the imprinting signal.Reinhard Stöger — 1993
• Comprehensive Structure-Function Analysis of the Core Domain of Human Telomerase RNAHinh Ly, Elizabeth H. Blackburn, Tristram G. Parslow — 2003
• Reprogramming Transcription via Distinct Classes of Enhancers Functionally Defined by eRNADong Wang, Ivan García-Bassets, Christopher Benner — 2011
• Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammalsMitchell Guttman, Ido Amit, Manuel Garber — 2009

Cited by

• Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis.Vicente María Escuin y Palop — 2012
• Pseudogenes: Newly Discovered Players in Human CancerLaura Poliseno — 2012
• Epigenetic Mechanisms of Depression and Antidepressants ActionAscensión Gómez García — 2012
• Long Non-Coding RNAs in Infection Biology裕次 調, 奈保子 日野, 圭一 高木 — 2013
• A double take on bivalent promoters.C. Robinson, H. Hoffmann, A. Cook — 2013
• Long Noncoding RNAs-Related Diseases, Cancers, and Drugs詹贤武, 邢植朝 — 2013
• WITHDRAWN: Down-regulation of long non-coding RNA TUG1 suppresses melanoma cell proliferation and induces apoptosis via up-regulating microRNA-9.Javier Larrosa, Gabriel Valiente, Gabriel Valiente — 2013
• Integrated Analysis of Dysregulated lncRNA Expression in Fetal Cardiac Tissues with Ventricular Septal DefectAndrew W Langford — 2013
• Overexpression of lncRNA H19 enhances carcinogenesis and metastasis of gastric cancerFlavia Barbat — 2014
• Comprehensive characterization of cancer subtype associated long non-coding RNAs and their clinical implicationsSalus Herrero — 2014
• Long Noncoding RNAs and Hepatocellular CarcinomaMatthieu Poirier — 2014
• lincRNA HOTAIR as a novel promoter of cancer progressionMaría Acale Sánchez — 2014
• Low expression of long noncoding RNA PANDAR predicts a poor prognosis of non-small cell lung cancer and affects cell apoptosis by regulating Bcl-2José Luis Henríquez, Jaime R. Montealegre Andrade, B. Defilippi — 2015
• The long non-coding RNA HNF1A-AS1 regulates proliferation and metastasis in lung adenocarcinomaMárcia Carréra Campos Leal, I Jiménez Pulido — 2015
• Effect of Environmental Chemical Stress on Nuclear Noncoding RNA Involved in Epigenetic ControlCourtney E Houde — 2015
• Linking RNA biology to lncRNAsSvetlana Melnikova — 2015
• Natural antisense RNA promotes 3′ end processing and maturation of MALAT1 lncRNAEmilio Carlos López Soler, Veronika Stefanov, José-Norberto Mazón — 2016
• Long noncoding NONRATT021972 siRNA normalized abnormal sympathetic activity mediated by the upregulation of P2X7 receptor in superior cervical ganglia after myocardial ischemiaEnrique Arrontes Caballero — 2016
• Epigenetic code and insect behavioural plasticity.Joanna M. Myers — 2016
• Uncovering the roles of long non-coding RNAs in cancer stem cellsAlexander Tcherepnin — 2017

Related papers

• RNase P RNA ofMycoplasma capricolumChisato Ushida, Dai Izawa, Akira Muto — 2004
• The extracellular RNA complement of Escherichia coliAnubrata Ghosal, Bimal Babu Upadhyaya, Joëlle V. Fritz — 2015
• 5′ and 3′ modifications controlling RNA degradation: from safeguards to executionersDominique Gagliardi, Andrzej Dziembowski — 2018
• Visualization and characterization of RNA–protein interactions in living cellsNingjun Duan, María del Carmen Guerrero Arroyo, Wen Deng — 2021
• Long Noncoding RNAs in Metabolic Syndrome Related DisordersMagdalena Łośko, Jerzy Kotlinowski, Jolanta Jura — 2016
• Circulating MicroRNA and Long Noncoding RNA as Biomarkers of Cardiovascular DiseasesQiang Shi, Xi Yang — 2016
• Computational approaches to discovering noncoding RNAPaul M. Krzyzanowski, Enrique M. Muro, Miguel A. Andrade‐Navarro — 2012
• The dichotomy of p53 regulation by noncoding RNAsQipan, Deng, Lindsey — 2014