The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
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- Type
- article
- Published
- 2008-09-19
- Cited by
- 3,647
- References
- 32
- Access
- Open access
- OpenAlex
- https://openalex.org/W1989348205
Keywords
Metagenomics, Pipeline (software), Computer science, Resource (disambiguation), Computational biology
References
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- Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
- Real-time DNA sequencing using detection of pyrophosphate release.
- The RAST Server: Rapid Annotations using Subsystems Technology
- ACLAME: A CLAssification of Mobile genetic Elements
- Metagenomic analysis of the microbial community associated with the coral Porites astreoides.
- A Standard MIGS/MIMS Compliant XML Schema: Toward the Development of the Genomic Contextual Data Markup Language (GCDML)
- The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
- SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
- Bacterial carbon processing by generalist species in the coastal ocean
- The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data
- Environmental Genome Shotgun Sequencing of the Sargasso Sea
- The Subsystems Approach to Genome Annotation and its Use in the Project to Annotate 1000 Genomes
- The European database on small subunit ribosomal RNA
- Metagenomic and Small-Subunit rRNA Analyses Reveal the Genetic Diversity of Bacteria, Archaea, Fungi, and Viruses in Soil
Cited by
- Tumor Vessels and Contrast Enhancement of Hepatocellular Carcinoma Demonstrated by Percutaneous Transhepatic Portography
- Lysosomal responses of fetal mouse hearts recovering from anoxia and substrate depletion.
- Assembly and Automated Annotation of the Clostridium scatologenes Genome
- The ecophysiology of nitrite-oxidizing bacteria in the genus Nitrospira
- [Herbal preparation Canephron N in the treatment of patients with urolithiasis].
- Action of cholecystokinin-octapeptide on sphincter of Oddi basal pressure and phasic wave activity in humans.
- [Prostatic volume: suprapubic versus transrectal ultrasonography in the control of benign prostatic hyperplasia].
- The gut microbiome of nonhuman primates: Lessons in ecology and evolution
- Metagenomic approaches to the discovery of cellulases.
- Deletion of poly(ADP-ribose) polymerase-1 changes the composition of the microbiome in the gut
- Extremophile deep-sea viral communities from hydrothermal vents: Structural and functional analysis.
- Essential role of NLRP3 and AIM2 inflammasomes in IL-1beta production induced by the extracellular pathogen, enterohemorrhagic Escherichia coli
- Desenvolvimento do pensamento algébrico através de tarefas de investigação matemática com padrões de crescimento
- A user's guide to quantitative and comparative analysis of metagenomic datasets.
- USING COMPARATIVE METAGENOMICS TO DETERMINE THE ROLE OF ATLANTIC BOTTLENOSE DOLPHINS (TURSIOPS TRUNCATUS) AS SENTINELS FOR HUMAN RESPIRATORY HEALTH
- Algorithms and tools for genome assembly and metagenome analysis
- Metagenomic trajectory of gut microbiome in the human lifespan
- Genomics for key players in the N cycle from guinea pigs to the next frontier.
- Metagenomics using next-generation sequencing.
- Bacterial Symbioses and the Innate Immune Response of the Model Host: Euprymna scolopes
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