The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
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Summary
The high accuracy of the GeneMANIA prediction algorithm, an intuitive user interface and large database make Gene MANIA a useful tool for any biologist.
- Type
- article
- Published
- 2010-06-21
- Cited by
- 4,465
- References
- 23
- Access
- Open access
- OpenAlex
- https://openalex.org/W1985213868
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:3076580
Keywords
Biology, Function (biology), Model organism, Organism, Computer science
References
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- Discovery of biological networks from diverse functional genomic data
- STRING 8—a global view on proteins and their functional interactions in 630 organisms
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- Online Predicted Human Interaction Database
- A critical assessment of Mus musculus gene function prediction using integrated genomic evidence
- Global networks of functional coupling in eukaryotes from comprehensive data integration.
- Learning with Local and Global Consistency
- NCBI GEO: archive for high-throughput functional genomic data
- Human protein reference database—2006 update
- MINT, the molecular interaction database: 2009 update
- The IntAct molecular interaction database in 2010
- The BioGRID Interaction Database: 2008 update
Cited by
- Phenotypic Plasticity and Epigenetics In The Honeybee Ovary
- GeneMANIA Prediction Server 2013 Update
- Modeling the genetic basis for human sleep disorders in Drosophila
- Protein signatures of oxidative stress response in a patient specific cell line model for autism
- Functional Genomics Evidence Unearths New Moonlighting Roles of Outer Ring Coat Nucleoporins
- Dysregulated expression of death, stress and mitochondrion related genes in the sciatic nerve of presymptomatic SOD1G93A mouse model of Amyotrophic Lateral Sclerosis
- Exogenous isoprene modulates gene expression in unstressed Arabidopsis thaliana plants.
- Gene co-expression analyses: an overview from microarray collections in Arabidopsis thaliana
- Regulation of glycosylphosphatidylinositol-anchored proteins and GPI-phospholipase D in a c-Myc transgenic mouse model of hepatocellular carcinoma and human HCC
- Identifying Functional Cancer-Specific miRNA-mRNA Interactions in Testicular Germ Cell Tumor
- Regulation of proinflammatory genes by the circulating microRNA hsa-miR-939
- Comprehensive Computational Analysis of GWAS Loci Identifies CCR2 as a Candidate Gene for Celiac Disease Pathogenesis
- Benchmarking selected computational gene network growing tools in context of virus-host interactions
- A schizophrenia-linked KALRN coding variant alters neuron morphology, protein function, and transcript stability
- Transcriptomic sequencing reveals diverse adaptive gene expression responses of human vascular smooth muscle cells to nitro-conjugated linoleic acid.
- Mapping the tumour human leukocyte antigen (HLA) ligandome by mass spectrometry
- Expression of the OAS Gene Family Is Highly Modulated in Subjects Affected by Juvenile Dermatomyositis, Resembling an Immune Response to a dsRNA Virus Infection
- Risk gene-set and pathways in 22q11.2 deletion-related schizophrenia: a genealogical molecular approach
- Gene Expression-Based Predictive Markers for Paclitaxel Treatment in ER+ and ER− Breast Cancer
- Theoretical and Algorithmic Solutions for Null models in Network Theory
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