Computing methods for icosahedral and symmetry-mismatch reconstruction of viruses by cryo-electron microscopy

Keywords

Icosahedral symmetry, Cryo-electron microscopy, Electron microscope, Symmetry (geometry), Microscopy

References

• Near-Atomic Resolution Structure Determination of a Cypovirus Capsid and Polymerase Complex Using Cryo-EM at 200kV.Atala Abad, César Augusto — 2017
• Automatic estimation and correction of anisotropic magnification distortion in electron microscopes.Timothy Grant, Nikolaus Grigorieff — 2015
• The Influence of Frame Alignment with Dose Compensation on the Quality of Single Particle ReconstructionsJohn Spear, Alex J. Noble, Qing Xie — 2015
• Single Particle Cryo-electron Microscopy and 3-D Reconstruction of VirusesFei Guo, Wen Jiang — 2014
• Classification and three-dimensional reconstruction of unevenly distributed or symmetry mismatched features of icosahedral particles.John A. G. Briggs, Juha T. Huiskonen, K.V. Fernando — 2005
• SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographsTanvir R. Shaikh, Haixiao Gao, William T. Baxter — 2008
• IMIRS: a high-resolution 3D reconstruction package integrated with a relational image database.Yao Liang — 2002
• Backbone structure of the infectious ε15 virus capsid revealed by electron cryomicroscopyWen Jiang, Matthew L. Baker, Joanita Jakana — 2008
• Near-atomic resolution reconstructions of icosahedral viruses from electron cryo-microscopyNikolaus Grigorieff, Stephen C. Harrison — 2011
• Cryo-electron microscopy of virusesMarc Adrian, Jacques Dubochet, Jean Lepault — 1984
• Procedures for three-dimensional reconstruction of spherical viruses by Fourier synthesis from electron micrographs.R.A. Crowther — 1971
• EMAN: semiautomated software for high-resolution single-particle reconstructions.Steven J. Ludtke, Philip R. Baldwin, Wah Chiu — 1999
• Cryo-EM structures of two bovine adenovirus type 3 intermediates.Lingpeng Cheng, Xiaoxing Huang, Xiaomin Li — 2014
• A model-based approach for determining orientations of biological macromolecules imaged by cryoelectron microscopy.Timothy S. Baker, R. Holland Cheng — 1996
• Identification of the Active Sites in the Methyltransferases of a Transcribing dsRNA VirusBin Zhu, Chongwen Yang, Hongrong Liu — 2014
• Near-atomic resolution using electron cryomicroscopy and single-particle reconstructionXing Zhang, Ethan C. Settembre, Chen Xu — 2008
• 3.88 Å structure of cytoplasmic polyhedrosis virus by cryo-electron microscopyXuekui Yu, Lei Jin, Zhen Zhou — 2008
• Visualization of a 4-helix bundle in the hepatitis B virus capsid by cryo-electron microscopyJames F. Conway, N. Cheng, Adam Zlotnick — 1997
• FREALIGN: high-resolution refinement of single particle structures.Nikolaus Grigorieff — 2007
• Three Dimensional Reconstructions of Spherical Viruses by Fourier Synthesis from Electron MicrographsR.A. Crowther, Linda Amos, J.T. Finch — 1970

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