Effect of substitution of photo-cross-linker in photochemical cytosine to uracil transition in DNA.
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Summary
New photo-cross-linkers based on 3-methoxycarbonlycarbazole, 3-carboxyvinylcarbazoles, and 3-carbonylamidevinyl carbazole resulted in greater acceleration of the deamination reaction than that achieved with CNVK.
- Type
- article
- Published
- 2017-08-15
- Cited by
- 9
- References
- 21
- OpenAlex
- https://openalex.org/W2625184394
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:23767361
Keywords
Deamination, Chemistry, Cytosine, Linker, Uracil
References
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- Altering the pathway of immunoglobulin hypermutation by inhibiting uracil-DNA glycosylase
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- Degradation of DNA by bisulfite treatment.
- CRISPR-Cas systems for genome editing, regulation and targeting
- An effect of K‐ras gene mutation on epidermal growth factor receptor signal transduction in PANC‐1 pancreatic carcinoma cells
- A molecular dynamics exploration of the catalytic mechanism of yeast cytosine deaminase.
- Reaction mechanism of zinc-dependent cytosine deaminase from Escherichia coli: a quantum-chemical study.
- Ultrafast reversible photo-cross-linking reaction: toward in situ DNA manipulation.
- Photo-regulation of constitutive gene expression in living cells by using ultrafast photo-cross-linking oligonucleotides.
- Catalytic mechanism of yeast cytosine deaminase: an ONIOM computational study.
- Combined QM(DFT)/MM molecular dynamics simulations of the deamination of cytosine by yeast cytosine deaminase (yCD)
- Teleseismic S wave microseisms
Cited by
- Multiplexed detection of nucleic acids using 19F NMR chemical shift changes based on DNA photo-cross-linking of 3-vinylcarbazole derivatives.
- Study of Photochemical Cytosine to Uracil Transition via Ultrafast Photo-Cross-Linking Using Vinylcarbazole Derivatives in Duplex DNA
- DNA Photocrosslinking Using 3-Vinylcarbazole Derivatives in Two-color Detection of Methylcytosine
- Ultra‐acceleration of Photochemical Cytosine Deamination by Using a 5′‐Phosphate‐Substituted Oligodeoxyribonucleotide Probe Containing a 3‐Cyanovinylcarbazole Nucleotide at Its 5′‐End
- Chemistries and capabilities of photo-formable and photoreversible crosslinked polymer networks
- Photochemical RNA Editing of C to U by Using Ultrafast Reversible RNA Photo‐crosslinking in DNA/RNA Duplexes
- The effect of 5-substituent in cytosine to the photochemical C to U transition in DNA strand.
- Effect of Hydrophilic Changes in Base Pair Mismatches on Deamination of Cytosine Photo-crosslinked to 3-Cyanovinylcarbazole
- Acceleration of the Deamination of Cytosine through Photo-Crosslinking
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