miRBase: microRNA sequences, targets and gene nomenclature
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Summary
The miRBase database aims to provide integrated interfaces to comprehensive microRNA sequence data, annotation and predicted gene targets, and acts as an independent arbiter of microRNA gene nomenclature.
- Type
- article
- Published
- 2005-12-28
- Cited by
- 4,890
- References
- 28
- Access
- Open access
- OpenAlex
- https://openalex.org/W2112192177
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:1280574
Keywords
MiRBase, Biology, microRNA, Annotation, Computational biology
References
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- Post-transcriptional gene silencing by siRNAs and miRNAs.
- Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.
- Fast and effective prediction of microRNA/target duplexes.
- MicroRNA targets in Drosophila
- A uniform system for microRNA annotation.
- MicroRNA biogenesis: coordinated cropping and dicing
- MicroRNA expression profiles classify human cancers
- The microRNA Registry
- The developmental role of microRNA in plants.
- Identification of Novel Genes Coding for Small Expressed RNAs
Cited by
- In Silico Study of Expression Profiles Correlation between MicroRNAs and Cancerous Genes
- Probabilistic Models for Collecting, Analyzing, and Modeling Expression Data
- RISC control for gene therapy
- CRSD: a comprehensive web server for composite regulatory signature discovery
- The small RNA world of plants.
- Analyzing micro-RNA expression using microarrays.
- Abnormal microRNA-16 locus with synteny to human 13q14 linked to CLL in NZB mice.
- miRNAs in cancer: approaches, aetiology, diagnostics and therapy.
- miRRim: a novel system to find conserved miRNAs with high sensitivity and specificity.
- Translational Medicine: microRNAs: a new emerging class of players for disease diagnostics and gene therapy
- Phenotype-defining functions of multiple non-coding RNA pathways
- Regulation of cyclin dependent kinase 6 by microRNA 124 in medulloblastoma
- Human cytomegalovirus microRNAs.
- Computational identification of 48 potato microRNAs and their targets
- GermSAGE: a comprehensive SAGE database for transcript discovery on male germ cell development
- Differentiation stage-specific expression of microRNAs in B lymphocytes and diffuse large B-cell lymphomas.
- In vivo profile of the human leukocyte microRNA response to endotoxemia.
- VisHiC—hierarchical functional enrichment analysis of microarray data
- Current knowledge of MicroRNAs and noncoding RNAs in virus-infected cells.
- First step in pre-miRNAs processing by human Dicer
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