The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
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Summary
An update on the online database resource Search Tool for the Retrieval of Interacting Genes (STRING), which provides uniquely comprehensive coverage and ease of access to both experimental as well as predicted interaction information.
- Type
- article
- Published
- 2010-11-02
- Cited by
- 3,523
- References
- 70
- Access
- Open access
- OpenAlex
- https://openalex.org/W2057545775
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:2700202
Keywords
Biology, Computational biology, String (physics), Database, Computer science
References
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- PAX of mind for pathway researchers.
- Biosynthesis and functions of bacillithiol, a major low-molecular-weight thiol in Bacilli
- Function prediction and protein networks.
- The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
- Role for protein–protein interaction databases in human genetics
- Reactome knowledgebase of human biological pathways and processes
- The BioGRID interaction database: 2013 update
- The HUPO PSI's Molecular Interaction format—a community standard for the representation of protein interaction data
- STITCH 2: an interaction network database for small molecules and proteins
- SMART 6: recent updates and new developments
- Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions
- Completing the uric acid degradation pathway through phylogenetic comparison of whole genomes
- MINT: the Molecular INTeraction database
- Systematizing the Generation of Missing Metabolic Knowledge
- CellML: its future, present and past.
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- Identification of a Target Gene and Activating Stimulus for the YpdA/YpdB Histidine Kinase/Response Regulator System in Escherichia coli
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- Genomic, Lipidomic and Metabolomic Analysis of Cyclooxygenase-null Cells: Eicosanoid Storm, Cross Talk, and Compensation by COX-1
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