Long noncoding RNAs in cell fate programming and reprogramming

Keywords

Biology, Reprogramming, Cell fate determination, Long non-coding RNA, Cell biology

References

• Human long non‐coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factorsLuis Ángel Ortiz de Pinedo Salazar — 2011
• The Xist lncRNA exploits three-dimensional genome architecture to spread across the X-chromosomeJ Engreitz, Amy Pandya‐Jones, Patrick McDonel — 2013
• Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cellsSabine Loewer, Moran N. Cabili, Mitchell Guttman — 2010
• Long noncoding RNAs: Cellular address codes in development and diseasePedro J. Batista, Howard Y. Chang — 2013
• Jarid2 Is Implicated in the Initial Xist-Induced Targeting of PRC2 to the Inactive X Chromosome.Simão Teixeira da Rocha, Valentina Boeva, Martín Escamilla-Del-Arenal — 2014
• The long non-coding RNA Fendrr links epigenetic control mechanisms to gene regulatory networks in mammalian embryogenesisPhillip Grote, Bernhard G. Herrmann — 2013
• Essential role of lncRNA binding for WDR5 maintenance of active chromatin and embryonic stem cell pluripotencyYul W. Yang, Ryan A. Flynn, Yong Chen — 2014
• The non-coding RNA Mistral activates Hoxa6 and Hoxa7 expression and stem cell differentiation by recruiting Mll1 to chromatinStéphane Bertani, Silvia Sauer, Eugene Bolotin — 2011
• Modelling Competing Endogenous RNA NetworksCarla Bosia, Andrea Pagnani, Riccardo Zecchina — 2013
• Polycomb proteins targeted by a short repeat RNA to the mouse X-chromosomeJing Zhao, Bryan K. Sun, Jennifer A. Erwin — 2008
• Genomic maps of lincRNA occupancy reveal principles of RNA-chromatin interactionsCi Chu, Kun Qu, Franklin L. Zhong — 2011
• Tsix RNA and the germline factor, PRDM14, link X-reactivation and stem cell reprogrammingBernhard Payer, Michael A. Rosenberg, Masashi Yamaji — 2013
• p63 regulates proliferation and differentiation of developmentally mature keratinocytes.Amy Truong, Markus Kretz, Todd W. Ridky — 2006
• The genomic binding sites of a noncoding RNAMatthew D. Simon, Charlotte I. Wang, Peter V. Kharchenko — 2011
• Female human iPS cells retain an inactive X-chromosomeJason Tchieu, Edward Kuoy, Mark H. Chin — 2010
• Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammalsMitchell Guttman, Ido Amit, Manuel Garber — 2009
• Control of somatic tissue differentiation by the long non-coding RNA TINCRMarkus Kretz, Zurab Siprashvili, Ci Chu — 2012
• An Evolutionarily Conserved Long Noncoding RNA TUNA Controls Pluripotency and Neural Lineage CommitmentNianwei Lin, Kung‐Yen Chang, Zhonghan Li — 2014
• Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivoAlexander Ramos, Aarón Díaz, Abhinav Nellore — 2013
• A Novel YY1-miR-1 Regulatory Circuit in Skeletal Myogenesis Revealed by Genome-Wide Prediction of YY1-miRNA NetworkLeina Lu, Liang Zhou, Eric Z. Chen — 2012

Cited by

• Genetic variation at the long noncoding RNA H19 gene is associated with the risk of hypertrophic cardiomyopathy.Joaquín Sánchez Cebrián — 2018
• Functions of plants long non-coding RNAs.Sarfraz Shafiq, Jingrui Li, Qianwen Sun — 2016
• Individuality and variation of personal regulomes in primary human T cellsKun Qu, Lisa C. Zaba, Paul G. Giresi — 2015
• Long noncoding RNA in hematopoiesis and immunity.Ansuman T. Satpathy, Howard Y. Chang — 2015
• The CASC15 long intergenic non-coding RNA locus is involved in melanoma progression and phenotype-switchingLaurent Lessard, Michelle Liu, Diego M. Marzese — 2015
• Long non-coding RNAs and their functions in plants.Julia A. Chekanova — 2015
• Identification and expression patterns of novel long non-coding RNAs in neural progenitors of the developing mammalian cortexJulieta Aprea, Mathias Lesche, Simone Massalini — 2015
• Tissue-specific epigenetics in gene neighborhoods: myogenic transcription factor genes.Sruti Chandra, Jolyon Terragni, Guoqiang Zhang — 2015
• Highly efficient in vitro and in vivo delivery of functional RNAs using new versatile MS2-chimeric retrovirus-like particlesAnne Prel, Vincent Caval, Régis Gayon — 2015
• Long non-coding RNA HOTTIP promotes tumor growth and inhibits cell apoptosis in lung cancer.H-P Deng, Ling Chen, Tao Fan — 2015
• Function and Regulation of the Tip60-p400 Complex in Embryonic Stem Cells: A DissertationPoshen B. Chen — 2015
• Mechanisms underlying the formation of induced pluripotent stem cellsFederico Gonzãlez, Danwei Huangfu — 2015
• The long non-coding RNA HOTTIP enhances pancreatic cancer cell proliferation, survival and migrationYating Cheng, Indira Jutooru, Gayathri Chadalapaka — 2015
• ATP-dependent chromatin remodeling shapes the long noncoding RNA landscapeE.A. Alcid, Toshio Tsukiyama — 2014
• Single cell transcriptome analysis reveals dynamic changes in lncRNA expression during reprogrammingDaniel H. Kim, Georgi K. Marinov, Shirley Pepke — 2015
• In vivo reprogramming for tissue repairChristophe Heinrich, Francesca M. Spagnoli, Benedikt Berninger — 2015
• The promise of enhancer-associated long noncoding RNAs in cardiac regeneration.Samir Ounzain, Thierry Pedrazzini — 2015
• Epigenetic Pathways Regulating Bone Homeostasis: Potential Targeting for Intervention of Skeletal DisordersJonathan A. R. Gordon, Martı́n Montecino, Rami I. Aqeilan — 2014
• The long noncoding RNA lncTCF7 promotes self-renewal of human liver cancer stem cells through activation of Wnt signaling.Yanying Wang, Lei He, Ying Du — 2015
• Roles for noncoding RNAs in cell-fate determination and regenerationMo Li, Juan Carlos Izpisúa Belmonte — 2015

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