International network of cancer genome projects

Keywords

Genome, Cancer, Biology, Computational biology, Genomics

References

• Mapping the cancer genome. Pinpointing the genes involved in cancer will help chart a new course across the complex landscape of human malignancies.Francis S. Collins, Anna D. Barker — 2007
• Wellcome funds cancer databaseDavid Dickson — 1999
• Benefits and Best Practices of Rapid Pre-Publication Data ReleaseToronto International Data Release Workshop Authors — 2009
• Mapping the cancer genomeFrancis S. Collins, Anna D. Barker — 2007
• The hallmarks of cancerTony Gutschner, Sven Diederichs — 2012
• Reactome knowledgebase of human biological pathways and processesLisa Matthews, Gopal Gopinath, Marc Gillespie — 2008
• Mutational evolution in a lobular breast tumour profiled at single nucleotide resolutionSohrab P. Shah, Ryan D. Morin, Jaswinder Khattra — 2009
• Translating insights from the cancer genome into clinical practiceLynda Chin, Joe W. Gray — 2008
• Patterns of somatic mutation in human cancer genomesChristopher Greenman, Philip Stephens, Raffaella Smith — 2007
• Comprehensive genomic characterization defines human glioblastoma genes and core pathwaysRoger E. McLendon — 2008
• An Integrated Genomic Analysis of Human Glioblastoma MultiformeD. Williams Parsons, Siân Jones, Xiaosong Zhang — 2008
• The cancer genomeMichael R. Stratton, Peter J. Campbell, P. Andrew Futreal — 2009
• Mutation of FOXL2 in granulosa-cell tumors of the ovary.Sohrab P. Shah, Martin Köbel, Janine Senz — 2009
• Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genesGillian L. Dalgliesh, Kyle Furge, Chris Greenman — 2010
• The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes.Kim D. Pruitt, Jennifer Harrow, Rachel Harte — 2009
• A second generation human haplotype map of over 3.1 million SNPsSarah S. Murray, David A. Hinds, Laura L. Stuvé — 2007
• dbSNP: the NCBI database of genetic variationStephen T. Sherry — 2001
• High Frequency of Mutations of the PIK3CA Gene in Human CancersYardena Samuels, Zhenghe Wang, Alberto Bardelli — 2004
• Recurring Mutations Found by Sequencing an Acute Myeloid Leukemia GenomeElaine R. Mardis, Li Ding, David J. Dooling — 2009
• COMPLEX LANDSCAPES OF SOMATIC REARRANGEMENT IN HUMAN BREAST CANCER GENOMESPhilip J. Stephens, David J. McBride, Meng‐Lay Lin — 2009

Cited by

• Remarkable difference of somatic mutation patterns between oncogenes and tumor suppressor genes.順二 山崎, 和幸 下澤, 啓一 今本 — 2011
• The breast cancer genome - a key for better oncologyThomas Hulin — 2011
• MAPK pathway activation in pilocytic astrocytomaR. Reisse, C. Collot, C. de Lamer — 2011
• Translating metastasis-related biomarkers to the clinic—progress and pitfalls殷旭辉 — 2013
• Individualized hepatocellular carcinoma risk: the challenges for designing successful chemoprevention strategies.Elena Raponi — 2013
• Understanding pancreatic cancer genomesQizhi Feng, Chunwu Yang, Xiuyun Lin — 2013
• Clinical and molecular characterization of HER2 amplified-pancreatic cancerPedro González Mira — 2013
• Deconvolving tumor purity and ploidy by integrating copy number alterations and loss of heterozygositySalvador Castaneda Vega, Laura Castillo Fuentes, Jonathan Gómez Hernández — 2014
• Challenges and opportunities for next-generation sequencing in companion diagnosticsHenri Robert van Maasdijk — 2015
• Genomic landscape of metastatic colorectal cancerJuan Carlos Losada Alvarez — 2014
• Generating a focused view of disease ontology cancer terms for pan-cancer data integration and analysisJacobus A. Ophoff, Reinhardt A. Botha — 2015
• Systematic chromatin state comparison of epigenomes associated with diverse properties including sex and tissue typePaulo Cezar Mendes Ramos — 2015
• Large-scale RNA-Seq Transcriptome Analysis of 4043 Cancers and 548 Normal Tissue Controls across 12 TCGA Cancer Types泰久 太田 — 2015
• Single‐cell profiling approaches to probing tumor heterogeneitySri Wahyuni — 2016
• Findings made in gene panel to whole genome sequencing: data, knowledge, ethics – and consequences?Klaus Schmidt-Hebbel Dunker, Luis Servén — 2016
• A practical approach to liver metastasis from unknown primary cancer: What surgeons need to know.Hanno Steen, van der — 2016
• Genetic basis of hepatitis virus-associated hepatocellular carcinoma: linkage between infection, inflammation, and tumorigenesis茂樹 枝廣, 亜矢 山口, 睦子 岡田 — 2016
• The rise of genomic profiling in ovarian cancerJorge Dubatti — 2016
• Impact of Nonsynonymous Single-Nucleotide Variations on Post-Translational Modification Sites in Human Proteins.Masaya Matsuda — 2017
• Selective identification of somatic mutations in pancreatic cancer cells through a combination of next-generation sequencing of plasma DNA using molecular barcodes and a bioinformatic variant filterYoji Kukita, Kazuyoshi Ohkawa, Ryoji Takada — 2018

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• Structural genomics: opportunities and challenges.Peer R. E. Mittl, Markus G. Grütter — 2001