Homeobox gene methylation in lung cancer studied by genome-wide analysis with a microarray-based methylated CpG island recovery assay

Keywords

Biology, Methylation, DNA methylation, Homeobox, CpG site

References

• CpG island methylator phenotype in cancerJosé Antonio Colmenero Guerra — 2004
• HOX genes in human lung: altered expression in primary pulmonary hypertension and emphysema.Heiko Golpon, Mark W. Geraci, Mark D. Moore — 2001
• X inactivation, differentiation, and DNA methylation.Arthur D. Riggs — 1975
• Compromised HOXA5 function can limit p53 expression in human breast tumoursVenu Raman, Shelby A. Martensen, David Reisman — 2000
• Epigenetic inactivation of a RAS association domain family protein from the lung tumour suppressor locus 3p21.3Reinhard Dammann, Chun Li, Jung‐Hoon Yoon — 2000
• The fundamental role of epigenetic events in cancerPeter A. Jones, Stephen B. Baylin — 2002
• Maintenance of functional equivalence during paralogous Hox gene evolutionJoy M. Greer, John Puetz, Kirk R. Thomas — 2000
• A gene hypermethylation profile of human cancer.Manel Esteller, Paul G. Corn, Stephen B. Baylin — 2001
• Early detection: The power and the promise of DNA methylation markersPeter W. Laird — 2003
• Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancerYeshayahu Schlesinger, Ravid Straussman, Ilana Keshet — 2007
• The genesis and evolution of homeobox gene clustersJordi García‐Fernàndez — 2005
• Global and Hox-specific roles for the MLL1 methyltransferase.Matthew G. Guenther, Richard G. Jenner, B. Chevalier — 2005
• Range of HOX/TALE superclass associations and protein domain requirements for HOXA13:MEIS interaction.Thomas M. Williams, Melissa Williams, Jeffrey W. Innis — 2005
• Reversal of Hox1 gene subfunctionalization in the mouse.Petr Tvrdík, Mario R. Capecchi — 2006
• The polycomb group protein EZH2 is involved in progression of prostate cancerSooryanarayana Varambally, Saravana M. Dhanasekaran, Ming Zhou — 2002
• Detection and interpretation of altered methylation patterns in cancer cellsToshikazu Ushijima — 2005
• Methylated-CpG island recovery assay: a new technique for the rapid detection of methylated-CpG islands in cancerTibor A. Rauch, Gerd P. Pfeifer — 2005
• Epigenetics in human disease and prospects for epigenetic therapyGerda Egger, Gangning Liang, Ana M. Aparicio — 2004
• SUZ12 is required for both the histone methyltransferase activity and the silencing function of the EED-EZH2 complex.Ru Cao, Yi Zhang — 2004
• A gene complex controlling segmentation in DrosophilaE. B. Lewis — 1978

Cited by

• Biological signature of HER2-positive breast cancerBreezy Malakkaran Lindqvist — 2013
• High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing.Thomas M. Brown, S. Baggett — 2009
• Epigenetic mechanisms and cancer: An interface between the environment and the genomePeter Mayer, Georg Edelmayer — 2011
• Genome‐wide DNA methylation analyses in lung adenocarcinomas: Association with EGFR, KRAS and TP53 mutation status, gene expression and prognosisLuis Calvo Cortijo, José Luis Pinos, José Luis Muñoz Ramírez — 2015
• Air pollution and DNA methylation alterations in lung cancer: A systematic and comparative studyIsmael Gil Romea — 2016
• DNA methylation in lung tissues of mouse offspring exposed in utero to polycyclic aromatic hydrocarbonsMaría Lojerio Camilleri — 2017
• HOX proteins and leukemia.Kajal Sitwala, Monisha Dandekar, Jay L. Hess — 2008
• Methylated-CpG Island Recovery AssayNatalie Mitchell, J. Tyson DeAngelis, Trygve O. Tollefsbol — 2011
• Genetic and Epigenetic Profiling of Mantle Cell Lymphoma and Chronic Lymphocytic LeukemiaAnna Margrét Halldórsdóttir — 2011
• DNA-Methylierung als epigenetischer Regulator von fünf Genen im nicht-kleinzelligen Lungenkarzinom (NSCLC)M. Weinzierl — 2012
• Identification of driver and passenger DNA methylation in cancer by epigenomic analysisSatish Kalari, Gerd P. Pfeifer — 2010
• Oncología clínica, genómica y epigenómica en cáncer broncogénico. Parte IICésar Misael Cerecedo Zapata, Rosario Gonzaga Pérez, Diego Armando Limón Rivas — 2009
• The MIRA method for DNA methylation analysisTibor A. Rauch, Gerd P. Pfeifer — 2009
• Epigenetic signatures of alcohol abuse and hepatitis infection during human hepatocarcinogenesisRyan A. Hlady, Rochelle L. Tiedemann, William Puszyk — 2014
• 生物芯片技术在肺癌研究中的应用价值Min Zhu, Jun Yu, Wenli Zhou — 2011
• HOXA11 hypermethylation is associated with progression of non-small cell lung cancerJung-Ah Hwang, Bo Bin Lee, Yujin Kim — 2013
• HOXA9 inhibits migration of lung cancer cells and its hypermethylation is associated with recurrence in non‐small cell lung cancerJung‐Ah Hwang, Bo Bin Lee, Yujin Kim — 2015
• Epigenetic Changes During Cell TransformationBernard W. Futscher — 2013
• DNA甲基化在肺癌早期诊断中的研究进展Xiaoming Qiu, Yanjie Qiao, Bin Liu — 2012
• Methylated DNA Immunoprecipitation and Microarray-Based Analysis: Detection of DNA Methylation in Breast Cancer Cell LinesYu-I Weng, Tim H-M. Huang, Pearlly S. Yan — 2009

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