Searching through sequence databases.

Keywords

GenBank, Sequence (biology), Similarity (geometry), Computer science, Information retrieval

References

• Prediction of Protein Structure and the Principles of Protein ConformationGerald D. Fasman — 1989
• Of urfs and orfs : a primer on how to analyze devised amino acid sequencesRussell F. Doolittle — 1986
• Cloning, sequencing and expression of complementary DNA encoding the muscarinic acetylcholine receptorTai Kubo, Kazuhiko Fukuda, Atsushi Mikami — 1986
• A simple method for displaying the hydropathic character of a protein.Jack Kyte, Russell F. Doolittle — 1982
• Cloning and expression of a rat D2 dopamine receptor cDNAJames R. Bunzow, Hubert H.M. Van Tol, David K. Grandy — 1988
• Simian sarcoma virus onc gene, v-sis, is derived from the gene (or genes) encoding a platelet-derived growth factor.Russell F. Doolittle, Michael W. Hunkapiller, Leroy Hood — 1983
• The genealogy of some recently evolved vertebrate proteinsRussell F. Doolittle — 1985
• Similar amino acid sequences: chance or common ancestry?Russell F. Doolittle — 1981
• Isolation and structure of a rhodopsin gene from D. melanogaster.Charles S. Zuker, Alan F. Cowman, Gerald M. Rubin — 1985
• Cloning, sequencing, and expression of the gene coding for the human platelet alpha 2-adrenergic receptor.Brian K. Kobilka, Hiroaki Matsui, Tong Sun Kobilka — 1987
• Antibody Active Sites and Immunoglobulin MoleculesS. J. Singer, Russell F. Doolittle — 1966
• Close similarity of epidermal growth factor receptor and v-erb-B oncogene protein sequencesJulian Downward, Yosef Yarden, E. L. V. Mayes — 1984
• Molecular genetics of human color vision: the genes encoding blue, green, and red pigments.Jeremy Nathans, Darcy Thomas, David S. Hogness — 1986
• A year in the life of the immunoglobulin superfamily.Alan F. Williams — 1987
• Platelet-derived growth factor is structurally related to the putative transforming protein p28sis of simian sarcoma virusMichael D. Waterfield, Geoffrey T. Scrace, Nigel Whittle — 1983
• Molecular characterization of a functional cDNA encoding the serotonin 1c receptor.David Julius, Amy B. MacDermott, Richard Axel — 1988
• Genes-in-pieces revisited.Walter Gilbert — 1985
• The immunoglobulin superfamily--domains for cell surface recognition.Abigail Williams, A. Neil Barclay — 1988
• A study of the evolution of repeated DNA sequences in primates and the existence of a new class of repetitive sequences in primates.Prescott L. Deininger, Carl W. Schmid — 1979
• Cloning of the gene and cDNA for mammalian β-adrenergic receptor and homology with rhodopsinRichard A. F. Dixon, Brian K. Kobilka, David J. Strader — 1986

Cited by

• Computational methods in protein structure comparison and analysis of protein interaction networksElena Zotenko — 2007
• The Protein Folding Problem and Tertiary Structure PredictionScott Wilson — 1994
• Bioinformatics: Databases and SystemsStanley Letovsky — 2013
• Freeze-substitution: origins and applications.Robert Shiurba — 2001
• Gene classification artificial neural systemCathy Wu — 1995
• Genomic Information RetrievalHugh Williams — 2003
• Nucleotide sequence and transcriptional regulation of the yeast recombinational repair gene RAD51George Basile, Mari Aker, Robert Mortimer — 1992
• The mouse male germ cell-specific gene Tpx-1: molecular structure, mode of expression in spermatogenesis, and sequence similarity to two non-mammalian genesNobuyuki Mizuki, Donna E. Sarapata, José A. García‐Sanz — 2004
• Structural and evolutionary characterization of the human sorbitol dehydrogenase gene duplicationIan Carr, Adrian Whitehouse, P. Louise Coletta — 1998
• Assessment of the allergenic potential of foods derived from genetically engineered crop plants.Dean D. Metcalfe, James D. Astwood, Rod Townsend — 1996
• The C. elegans unc-18 gene encodes a protein expressed in motor neurons.Keiko Gengyo‐Ando, Yasuko Kamiya, Ayanori Yamakawa — 1993
• SGP-1: prediction and validation of homologous genes based on sequence alignments.Thomas Wiehe, Steffi Gebauer-Jung, Thomas Mitchell‐Olds — 2001
• Survey of current protein family databases and their application in comparative, structural and functional genomics.Oliver Redfern, Alastair Grant, Michael Maibaum — 2005
• The coevolution of gene family trees.Karl J. Fryxell — 1996
• Multiresolution Analysis of DNA SequencesEric W. Linton, Paul Albee, Patrick Kinnicutt — 2010
• Neural networks for full-scale protein sequence classification: Sequence encoding with singular value decompositionCathy Wu, Michael W. Berry, Sailaja Shivakumar — 1995
• Divergent and common groups of proteins in glands of venomous snakesVincent Rioux, Marie‐Christine Gerbod, Françoise Bouet — 1998
• An Algorithm for Approximate Tandem RepeatsGad M. Landau, Jeanette P. Schmidt, Dina Sokol — 1993
• Enzymes depending on the pterin molybdenum cofactor: sequence families, spectroscopic properties of molybdenum and possible cofactor-binding domains.John C. Wootton, Rachel E. Nicolson, J. Mark Cock — 1991
• Supersites within superfolds. Binding site similarity in the absence of homology.Robert B. Russell, Peter Sasieni, Michael J.E. Sternberg — 1998

Related papers

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• Human Immunodeficiency Virus Reverse Transcriptase and Protease Sequence DatabaseRobert W. Shafer — 2000
• Efficient Mining of Closed Repetitive Gapped Subsequences from a Sequence DatabaseBolin Ding, David Lo, Jiawei Han — 2009
• Human Immunodeficiency Virus Reverse Transcriptase and Protease Sequence DatabaseRobert W. Shafer, Derek Stevenson, Bryan Chan — 1999
• The EMBL Nucleotide Sequence DatabaseG. Stoesser, Peter Sterk, Mary Ann Tuli — 1997
• The EMBL nucleotide sequence databaseG Stoesser — 1998
• A survey of genes in Eimeria tenella merozoites by EST sequencing.Kiew‐Lian Wan, Saw-Peng Chong, Szu-Ting Ng — 1999