SGP-1: prediction and validation of homologous genes based on sequence alignments.

Keywords

Biology, Gene prediction, Synteny, Gene, Computational biology

References

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Cited by

• Classification d'ARN codants et d'ARN non-codantsA. Fontaine — 2009
• AGenDA: Gene Prediction by Comparative Sequence AnalysisOliver Rinner, Burkhard Morgenstern — 2002
• Comparative analysis of eukaryotic gene sequence featuresAbril Ferrando, Josep Francesc — 2005
• The integration of sequencing and bioinformatics in metagenomicsFirouz Abbasian, Robin Lockington, Mallavarapu Megharaj — 2015
• Comparative GenomicsJames R. Brown — 2007
• NovelFam3000 – Uncharacterized human protein domains conserved across model organismsDanielle Kemmer, Raf M. Podowski, David J. Arenillas — 2006
• PipMaker: A World Wide Web Server for Genomic Sequence AlignmentsLaura Elnitski, Cathy Riemer, Scott Schwartz — 2003
• Approaches to Fungal Genome AnnotationBrian J. Haas, Qiandong Zeng, Matthew D. Pearson — 2011
• Applied bioinformatics for gene characterizationRaf M. Podowski — 2006
• The Retinome – Defining a reference transcriptome of the adult mammalian retina/retinal pigment epitheliumHeidi L. Schulz, Thomas Goetz, Juergen Kaschkoetoe — 2004
• Gene annotation: prediction and testing.Jennifer Ashurst, John Collins — 2003
• CSAM: Using Clustering-Hashing-Signal Anchoring Method to Explore Human Novel GenesChun-Min Hung, Yueh‐Min Huang, Ming-Shi Chang — 2006
• Comparative genomics: genome-wide analysis in metazoan eukaryotesAbel Ureta‐Vidal, Laurence Ettwiller, Ewan Birney — 2003
• The computational challenges of applying comparative-based computational methods to whole genomesInna Dubchak — 2002
• Plant evolutionary genomics.Thomas Mitchell‐Olds, Maria J. Clauss — 2002
• Global predictions and tests of erythroid regulatory regions.Ross C. Hardison, Francesca Chiaromonte, Diana L. Kolbe — 2003
• Comparative genomics of Dictyostelium discoideum and Entamoeba histolytica.Ludwig Eichinger, Angelika A. Noegel — 2005
• Valid: Validation of Protein Sequence Quality Based on Multiple Alignment DataLaurent Bianchetti, Julie Thompson, Odile Lecompte — 2005
• AGenDA: gene prediction by cross-species sequence comparisonLeila Taher, Oliver Rinner, Saurabh Garg — 2004
• Computational prediction of eukaryotic protein-coding genesMichael Q. Zhang — 2002

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