CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database
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Summary
A new Resistomes & Variants module provides analysis and statistical summary of in silico predicted resistance variants from 82 pathogens and over 100 000 genomes, able to summarize predicted resistance using the information included in CARD, identify trends in AMR mobility and determine previously undescribed and novel resistance variants.
- Type
- article
- Published
- 2019-10-29
- Cited by
- 3,016
- References
- 49
- Access
- Open access
- OpenAlex
- https://openalex.org/W2982531601
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:204966823
Keywords
Resistome, Biology, Antibiotics, Antibiotic resistance, Microbiology
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- The 27th annual Nucleic Acids Research database issue and molecular biology database collection
- Antibiotic resistance patterns of Pseudomonas spp. isolated from faecal wastes in the environment and contaminated surface water.
- Genomic characterization of a multidrug-resistant Mycoplasma hominis recovered from a synovial fluid sample in China.
- Complete Genome Sequences of Four Isolates of Vancomycin-Resistant Enterococcus faecium with the vanA Gene and Two Daptomycin Resistance Mutations, Obtained from Two Inpatients with Prolonged Bacteremia
- Metrics for Public Health Perspective Surveillance of Bacterial Antibiotic Resistance in Low- and Middle-Income Countries
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- Rapid Design of a Bait Capture Platform for Culture- and Amplification-Free Next-Generation Sequencing of SARS-CoV-2
- Draft whole-genome sequence of Brevibacterium casei strain isolated from a bloodstream infection
- Multi-omic surveillance of Escherichia coli and Klebsiella spp. in hospital sink drains and patients
- Bactopia: a Flexible Pipeline for Complete Analysis of Bacterial Genomes
- Broad-Spectrum Cephalosporin-Resistant Klebsiella spp. Isolated from Diseased Horses in Austria
- PSORTm: a bacterial and archaeal protein subcellular localization prediction tool for metagenomics data
- The utility of a metagenomics approach for marine biomonitoring
- Antibiotic resistance genes and class 1 integron: Evidence of fecal pollution as a major driver for their abundance in water and sediments impacted by metal contamination and wastewater in the Andean region of Bolivia
- Platforms for elucidating antibiotic resistance in single genomes and complex metagenomes.
- Acinetobacter pullorum sp. nov., Isolated from Chicken Meat
- Fast protein database as a service with kAAmer
- Metagenome-assembled genome binning methods with short reads disproportionately fail for plasmids and genomic Islands
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