The complete chloroplast genome sequence of the medicinal plant Paeonia delavayi Franchet. (Paeoniaceae)
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Summary
The phylogenetic analysis indicated P. delavayi was closely related to P. ludlowii, and the complete chloroplast genome sequence was sequenced to investigate its phylogenetic relationship in the family Paeoniaceae.
- Type
- article
- Published
- 2019-07-03
- Cited by
- 1
- References
- 18
- Access
- Open access
- OpenAlex
- https://openalex.org/W2980462484
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:208600535
Keywords
Biology, Inverted repeat, Genome, Phylogenetic tree, Gene
References
- A study of the genus Paeonia
- Karyotypes of four wild Paeonia species from Greece
- Highly effective sequencing whole chloroplast genomes of angiosperms by nine novel universal primer pairs
- Comparative studies on species identification of Noctuoidea moths in two nature reserve conservation zones (Beijing, China) using DNA barcodes and thin‐film biosensor chips
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- Chloroplast DNA phylogeny, reticulate evolution, and biogeography of Paeonia (Paeoniaceae).
- Trimmomatic: a flexible trimmer for Illumina sequence data
- Automatic annotation of organellar genomes with DOGMA
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.
- tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes
- OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes
- Interspecific Relationship among the Wild Species of Paeonia Sect. Moutan DC with ITS and matK Sequence
- GetOrganelle: a simple and fast pipeline for de novo assembly of a complete circular chloroplast genome using genome skimming data
- GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
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