The genetic map of goldfish (Carassius auratus) provided insights to the divergent genome evolutions in the Cyprinidae family
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Summary
A high-density linkage map of goldfish (Carassius auratus) was constructed using RNA-sequencing, and it was illustrated that most goldfish markers were orthologous to genes in common carp, which had four rounds of WGD.
- Type
- article
- Published
- 2016-10-06
- Cited by
- 24
- References
- 50
- Access
- Open access
- OpenAlex
- https://openalex.org/W2528904584
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:1839079
Keywords
Synteny, Biology, Cyprinidae, Zebrafish, Genome
References
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- Using the Basic Local Alignment Search Tool (BLAST).
- CONNECTIVE TISSUE GROWTH FACTOR IS A TARGET OF NOTCH SIGNALING IN CELLS OF THE OSTEOBLASTIC LINEAGE
- The zebrafish reference genome sequence and its relationship to the human genome
- A genetic linkage map and comparative genome analysis of common carp (Cyprinus carpio L.) using microsatellites and SNPs
- Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication
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- Evolutionary history of two divergent Dmrt1 genes reveals two rounds of polyploidy origins in gibel carp.
Cited by
- A Dense Brown Trout (Salmo trutta) Linkage Map Reveals Recent Chromosomal Rearrangements in the Salmo Genus and the Impact of Selection on Linked Neutral Diversity
- Genomic and transcriptomic approaches to study immunology in cyprinids: What is next?
- Construction of a high-density linkage map and fine mapping of QTLs for growth and gonad related traits in blunt snout bream
- A High-Density Genetic Linkage Map and QTL Fine Mapping for Body Weight in Crucian Carp (Carassius auratus) Using 2b-RAD Sequencing
- Challenges and advances for transcriptome assembly in non-model species
- De novo assembly of the goldfish (Carassius auratus) genome and the evolution of genes after whole-genome duplication
- Construction of a high-density genetic map by RNA sequencing and eQTL analysis for stem length and diameter in Dendrobium (Dendrobium nobile × Dendrobium wardianum)
- Neuroendocrinology of reproduction: Is Gonadotropin-Releasing Hormone (GnRH) dispensable?
- Suppression of leptin-AI/AII transcripts by insulin in goldfish liver: a fish specific response of leptin under food deprivation.
- Review of resistance to chronic ionizing radiation exposure under environmental conditions in multicellular organisms.
- Functional characterization of grass carp (Ctenopharyngodon idella) interleukin-2 in head kidney leukocytes.
- Research advances in the genomics and applications for molecular breeding of aquaculture animals
- From asymmetrical to balanced genomic diversification during rediploidization: Subgenomic evolution in allotetraploid fish
- First high-resolution genetic linkage map of taimen (Hucho taimen) and its application in QTL analysis of growth-related traits
- A first genetic linage map construction and QTL mapping for growth traits in Larimichthys polyactis
- Investigation into Adaptation in Genes Associated with Response to Estrogenic Pollution in Populations of Roach (Rutilus rutilus) Living in English Rivers.
- Susceptibility of Goldfish to Cyprinid Herpesvirus 2 (CyHV-2) SH01 Isolated from Cultured Crucian Carp
- Functional characterization of Atlantic salmon (Salmo salar L.) PepT2 transporters
- Shark and ray genome size estimation: methodological optimization for inclusive and controllable biodiversity genomics
- Source diversity of Artemia enrichment boosts goldfish (Carassius auratus) performance, β-carotene content, pigmentation, immune-physiological and transcriptomic responses
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