InterProScan - an integration platform for the signature-recognition methods in InterPro
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Summary
The Perl-based InterProScan implementation is available from the EBI ftp server (ftp://ftp.ebi.ac.uk/pub/software/unix/iprscan/) and the SRS-basedInterProScan is available upon request.
- Type
- article
- Published
- 2001-09-01
- Cited by
- 3,055
- References
- 10
- OpenAlex
- https://openalex.org/W2022366078
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:9302284
Keywords
Perl, File Transfer Protocol, Unix, Computer science, Scalability
References
- SRS: information retrieval system for molecular biology data banks.
- FingerPRINTScan: intelligent searching of the PRINTS motif database
- Recent improvements of the ProDom database of protein domain families
- SMART: a web-based tool for the study of genetically mobile domains
- PRINTS-S: the database formerly known as PRINTS
- The PROSITE database, its status in 2002
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- The InterPro database, an integrated documentation resource for protein families, domains and functional sites
- The PROSITE database, its status in 1999
- The Pfam protein families database
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