Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea
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Summary
The findings show that ammonia-oxidizing Archaea and Bacteria were adapted to contrasted conditions and that the Thaumarchaeota MGI diversity probably corresponds to distinct metabolisms or life strategies.
- Type
- article
- Published
- 2015-04-08
- Cited by
- 20
- References
- 65
- Access
- Open access
- OpenAlex
- https://openalex.org/W2004212884
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:17591730
Keywords
Thaumarchaeota, Biology, Archaea, Euryarchaeota, Methanosaeta
References
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- Archaeal amoA gene diversity points to distinct biogeography of ammonia-oxidizing Crenarchaeota in the ocean
- Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling.
- Seasonality in bacterial diversity in north-west Mediterranean coastal waters: assessment through clone libraries, fingerprinting and FISH.
- Targeting spatiotemporal dynamics of planktonic SAGMGC-1 and segregation of ammonia-oxidizing thaumarchaeota ecotypes by newly designed primers and quantitative polymerase chain reaction.
- The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations
- Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters
- Partialling out the spatial component of ecological variation
- Dynamics of ammonia-oxidizing Archaea and Bacteria in contrasted freshwater ecosystems.
- Estuarine Nitrifiers: New Players, Patterns and Processes
- Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota
- Phylogenetic Affiliation of SSU rRNA Genes Generated by Massively Parallel Sequencing: New Insights into the Freshwater Protist Diversity
- Rapid Detection and Quantification of Members of the Archaeal Community by Quantitative PCR Using Fluorogenic Probes
- DETERMINATION OF CHLOROPHYLL AND PHEO‐PIGMENTS: SPECTROPHOTOMETRIC EQUATIONS1
- Remarkably diverse and contrasting archaeal communities in a large arctic river and the coastal Arctic Ocean
- Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea
- Archaeal amoA and ureC genes and their transcriptional activity in the Arctic Ocean
- Global patterns in bacterial diversity
Cited by
- Archaeal community in a human-disturbed watershed in southeast China: diversity, distribution, and responses to environmental changes
- Temporal and Spatial Dynamics of Archaeal Communities in Two Freshwater Lakes at Different Trophic Status
- Influences of plant type on bacterial and archaeal communities in constructed wetland treating polluted river water
- Microbial community variation in an Arctic shelf seafloor. Biogeographic and anthropogenic influences
- Environmental controls on estuarine nitrifying communities along a salinity gradient.
- Schrödinger’s microbes: Tools for distinguishing the living from the dead in microbial ecosystems
- Diel Rhythm Does Not Shape the Vertical Distribution of Bacterial and Archaeal 16S rRNA Transcript Diversity in Intertidal Sediments: a Mesocosm Study
- Basin Scale Variation on the Composition and Diversity of Archaea in the Pacific Ocean
- Diversity and distribution of Archaea in global estuarine ecosystems.
- A comparison of methods used to unveil the genetic and metabolic pool in the built environment
- The activity of nitrifying microorganisms in a high-altitude Andean wetland.
- Comprehensive Insights Into Composition, Metabolic Potentials, and Interactions Among Archaeal, Bacterial, and Viral Assemblages in Meromictic Lake Shunet in Siberia
- Salinity stress changed the biogeochemical controls on CH4 and N2O emissions of estuarine and intertidal sediments.
- Dynamics of microbial communities across the three domains of life over an annual cycle with emphasis on marine mucilage in the Southern Bay of Biscay resolved by microbial fingerprinting
- Hydrography shapes community composition and diversity of amoA‐containing Thaumarchaeota in the coastal waters off central Chile
- Exploring the Diversity of Active Ureolytic Bacteria in the Rumen by Comparison of cDNA and gDNA
- Diversity of archaea in tropical and subtropical estuarine-lagoon ecosystems. A synthesis
- Distinct patterns of distribution, community assembly and cross-domain co-occurrence of planktonic archaea in four major estuaries of China
- Temporal dynamics of abundant and rare nitrifying and denitrifying communities in paddy soils under wetting-drying cycles
- Seasonal dynamics and environmental controls of planktonic archaea in a typical subtropical estuary
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