Is My Network Module Preserved and Reproducible?
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Summary
This work studies several types of network preservation statistics that do not require a module assignment in the test network, and finds that several human cortical modules are less preserved in chimpanzees.
- Type
- article
- Published
- 2011-01-01
- Cited by
- 967
- References
- 58
- Access
- Open access
- OpenAlex
- https://openalex.org/W1974033269
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:11417426
Keywords
Pairwise comparison, Computer science, Network analysis, Correlation, Biological network
References
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- Sonic Hedgehog signaling in the mammalian brain
- MAP’ing CNS Development and Cognition: An ERKsome Process
- A Systems Genetics Approach Implicates USF1, FADS3, and Other Causal Candidate Genes for Familial Combined Hyperlipidemia
Cited by
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- Temporal analysis of hippocampal CA3 gene coexpression networks in a rat model of febrile seizures
- Identification of potential functional genes in papillary thyroid cancer by co-expression network analysis
- Integrative analysis identifies DNMTs against immune-infiltrating neutrophils and dendritic cells in colorectal cancer
- Co-expression network analysis identifies novel molecular pathways associated with cadmium and pyriproxyfen testicular toxicity in Gammarus fossarum.
- Clustering and Registration of Functional Data with Applications in Time Course Genomics Data
- Cliques consensuais em redes de co-expressão gênica em estudos de transcriptoma relacionados ao diabetes do tipo 2
- Coexpression and cosplicing network approaches for the study of mammalian brain transcriptomes.
- Gardening Effect of Host Genetics on Human Intestinal Mucosal Microbiome and Its Link to Inflammatory Bowel Disease
- Distances and Stability in Biological Network Theory
- A co-expression network analysis reveals lncRNA abnormalities in peripheral blood in early-onset schizophrenia.
- An Integrative Genomic Study Implicates the Postsynaptic Density in the Pathogenesis of Bipolar Disorder
- Systems biology and gene networks in neurodevelopmental and neurodegenerative disorders
- Integrated network analysis and logistic regression modeling identify stage-specific genes in Oral Squamous Cell Carcinoma
- Cosplicing network analysis of mammalian brain RNA-Seq data utilizing WGCNA and Mantel correlations
- Functional characterization of drought-responsive modules and genes in Oryza sativa: a network-based approach
- Comparison of Clustering Methods for Time Course Genomic Data: Applications to Aging Effects
- Differential activation of immune/inflammatory response-related co-expression modules in the hippocampus across the major psychiatric disorders
- The human transcriptome across tissues and individuals
- Beyond Modules & Hubs: the potential of gene coexpression networks for investigating molecular mechanisms of complex brain disorders
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