16S rRNA sequences of uncultivated hot spring cyanobacterial mat inhabitants retrieved as randomly primed cDNA
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Summary
The retrieval of 16S rRNA sequences from three formerly uncultured community members are reported, one of which was retrieved three times from a total of five sequences analyzed, and can be placed in the cyanobacterial phylum.
- Type
- article
- Published
- 1991-04-01
- Cited by
- 128
- References
- 31
- Access
- Open access
- OpenAlex
- https://openalex.org/W1853907807
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:6902029
Keywords
Biology, 16S ribosomal RNA, Ribosomal RNA, Phylogenetic tree, Sequence analysis
References
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- Reverse transcriptase sequencing of 16S ribosomal RNA from Faenia rectivirgula, Pseudonocardia thermophila and Saccharopolyspora hirsuta, three wall type IV actinomycetes which lack mycolic acids.
Cited by
- Gel layer formation on membranes in Membrane Bioreactors
- Previously unknown and phylogenetically diverse members of the green nonsulfur bacteria are indigenous to freshwater lakes
- Evolution of heliobacteria: implications for photosynthetic reaction center complexes.
- Caractérisation des communautés procaryotiques impliquées dans la bioremédiation d'un sol pollué par des hydrocarbures et développement d'outils d'analyse à haut débit : les biopuces ADN
- Impact of Culture-Independent Studies on the Emerging Phylogenetic View of Bacterial Diversity
- The distribution of cultivated and uncultivated cyanobacteria and green non-sulfur bacteria in hot spring microbial mats
- Developing Methods for the Rapid Molecular Assessment of Aquatic Microbial Communities
- Applied Microbial Systematics
- Thermophiles Biodiversity, Ecology, and Evolution
- Estimation of diversity and community structure through restriction fragment length polymorphism distribution analysis of bacterial 16S rRNA genes from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii
- Subseafloor archaeal communities: from the surface to a deep hot biosphere ?
- Detection of polychlorinated biphenyl degradation genes in polluted sediments by direct DNA extraction and polymerase chain reaction
- Biodiversity within hot spring microbial mat communities: molecular monitoring of enrichment cultures
- Distribution of sulfate-reducing bacteria in a stratified fjord (Mariager Fjord, Denmark) as evaluated by most-probable-number counts and denaturing gradient gel electrophoresis of PCR-amplified ribosomal DNA fragments
- Uncultivated cyanobacteria, Chloroflexus-like inhabitants, and spirochete-like inhabitants of a hot spring microbial mat
- Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
- Evaluation of nearest-neighbor methods for detection of chimeric small-subunit rRNA sequences
- Recognition of chimeric small-subunit ribosomal DNAs composed of genes from uncultivated microorganisms
- Exploring the metagenome of the Baltic Sea sediment
- Analysis of microbial community structures and functions in heavy metal-contaminated soils using molecular methods
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