Non-Bisphosphonate Inhibitors of Isoprenoid Biosynthesis Identified via Computer-Aided Drug Design
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Summary
The relaxed complex scheme, a virtual‐screening methodology that accounts for protein receptor flexibility, was used to identify a low‐micromolar, non‐bisphosphonate inhibitor of farnesyl diphosphate synthase.
- Type
- article
- Published
- 2011-08-03
- Cited by
- 46
- References
- 68
- Access
- Open access
- OpenAlex
- https://openalex.org/W1564616538
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:16845280
Keywords
Farnesyl diphosphate synthase, ATP synthase, Bisphosphonate, Chemistry, Virtual screening
References
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- Antibiotics For Emerging Pathogens
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- FEP-guided selection of bicyclic heterocycles in lead optimization for non-nucleoside inhibitors of HIV-1 reverse transcriptase.
- Molecular dynamics: survey of methods for simulating the activity of proteins.
- Protein data bank
- Sterol methenyl transferase inhibitors alter the ultrastructure and function of the Leishmania amazonensis mitochondrion leading to potent growth inhibition.
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- Computational drug design accommodating receptor flexibility: the relaxed complex scheme.
- Binding of nitrogen-containing bisphosphonates (N-BPs) to the Trypanosoma cruzi farnesyl diphosphate synthase homodimer
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- Farnesyl Pyrophosphate Synthase Is an Essential Enzyme in Trypanosoma brucei
- Computational study of the mechanism and the relative free energies of binding of anticholesteremic inhibitors to squalene-hopene cyclase.
- The mevalonate pathway in parasitic protozoa and helminths.
- PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations
- Lovastatin Inhibits Interferon-γ-Induced Trypanosoma brucei brucei Proliferation: Evidence for Mevalonate Pathway Involvement
Cited by
- Species Differences in Alternative Substrate Utilization by the Antibacterial Target Undecaprenyl Pyrophosphate Synthase
- Novel cruzain inhibitors for the treatment of Chagas’ disease
- Antagonism screen for inhibitors of bacterial cell wall biogenesis uncovers an inhibitor of undecaprenyl diphosphate synthase
- Antibacterial drug leads targeting isoprenoid biosynthesis
- Undecaprenyl Diphosphate Synthase Inhibitors: Antibacterial Drug Leads
- Discovery of Novel Inhibitors of HIV-1 Reverse Transcriptase Through Virtual Screening of Experimental and Theoretical Ensembles
- Molecular Simulations of Aromatase Reveal New Insights Into the Mechanism of Ligand Binding
- Deciphering the Metabolism of Undecaprenyl-Phosphate: The Bacterial Cell-Wall Unit Carrier at the Membrane Frontier
- Exploring the Role of Receptor Flexibility in Structure-Based Drug Discovery
- Anti-Infectious Agents against MRSA
- Spirohexalines, new inhibitors of bacterial undecaprenyl pyrophosphate synthase, produced by Penicillium brasilianum FKI-3368
- Structure, function and inhibition of ent-kaurene synthase from Bradyrhizobium japonicum
- ST‐analyzer: A web‐based user interface for simulation trajectory analysis
- LigMerge: A Fast Algorithm to Generate Models of Novel Potential Ligands from Sets of Known Binders
- Isoprenoid biosynthesis in bacterial pathogens.
- A Molecular Dynamics Investigation of Mycobacterium tuberculosis Prenyl Synthases: Conformational Flexibility, and Implications for Computer-Aided Drug Discovery
- Molecular dynamics simulations and drug discovery
- Farnesyl diphosphate synthase inhibitors from in silico screening
- Antibacterial Drug Leads: DNA and Enzyme Multi-Targeting
- Investigating the impact of missense mutations in hCES1 by in silico structure-based approaches
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