Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
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Summary
This work has approached a complete assembly and mapping of the nonsatellite component of Drosophila heterochromatin and constructed a bacterial artificial chromosome–based physical map and a cytogenetic map that positions 11 Mb in specific chromosomal locations.
- Type
- article
- Published
- 2007-06-15
- Cited by
- 306
- References
- 29
- Access
- Open access
- OpenAlex
- https://openalex.org/W297633788
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:2677037
Keywords
Heterochromatin, Contig, Centromere, Sequence (biology), Drosophila melanogaster
References
- An Essential Guide to the Basic Local Alignment Search Tool
- The Eukaryote Genome in Development and Evolution
- Looking at Drosophila mitotic chromosomes.
- Unfolding the mysteries of heterochromatin.
- Imaging Substrate-Mediated Interactions
- An assessment of the sequence gaps: Unfinished business in a finished human genome
- Spreading of silent chromatin: inaction at a distance
- Functional elements in Drosophila melanogaster heterochromatin.
- Centric Heterochromatin and the Efficiency of Achiasmate Disjunction in Drosophila Female Meiosis
- Multiplicity of satellite DNA sequences in Drosophila melanogaster.
- Perturbation of nuclear architecture by long-distance chromosome interactions.
- The BDGP Gene Disruption Project
- Genomic analysis of Drosophila melanogaster telomeres: full-length copies of HeT-A and TART elements at telomeres.
- Heterochromatic sequences in a Drosophila whole-genome shotgun assembly
- Genetics of P-element transposition into Drosophila melanogaster centric heterochromatin.
- A BAC-based physical map of the major autosomes of Drosophila melanogaster.
- Finishing a whole-genome shotgun: Release 3 of the Drosophila melanogaster euchromatic genome sequence
- Efficient recovery of centric heterochromatin P-element insertions in Drosophila melanogaster.
- The genome sequence of Drosophila melanogaster.
- The Drosophila gene collection: identification of putative full-length cDNAs for 70% of D. melanogaster genes.
Cited by
- Expression of SNMP1 and SNMP2 genes in antennal sensilla of Spodoptera exigua (Hübner).
- TE variation in natural populations of Drosophila : copy number, transcription and chromatin state
- Re-replication in the Absence of Replication Licensing Mechanisms in Drosophila Melanogaster
- Methods for meiotic chromosome preparation, immunofluorescence, and fluorescence in situ hybridization in Daphnia pulex.
- The organization, regulation and functions of genes in the pericentric heterochromatin of the Drosophila melanogaster third chromosome
- GFA T7IZEPPELIN IS AN ESSENTIAL HETEROCHROMATIC GENE INVOLVED IN CUTICLE FORMATION IN D. MELANOGASTER.
- Fluorescence in situ hybridization with Bacterial Artificial Chromosomes (BACs) to mitotic heterochromatin of Drosophila.
- A Molecularly Defined Duplication Set for the X Chromosome of Drosophila melanogaster
- Rheb G-Proteins and the Activation of mTORC1
- Effects of permissible maximum-contamination levels of VOC mixture in water on total DNA, antioxidant gene expression, and sequences of ribosomal DNA of Drosophila melanogaster
- Optimization of Gene Prediction via More Accurate Phylogenetic Substitution Models
- Identification and expression of a new member of the pyrokinin/pban gene family in the sand fly Phlebotomus papatasi.
- The Analysis of Pendolino (peo) Mutants Reveals Differences in the Fusigenic Potential among Drosophila Telomeres
- Sex And Heterochromatin: An Investigation Of Sexual Dimorphism In Drosophila Melanogaster
- Comparative transcriptomics of long intergenic noncoding RNAs in Drosophila
- Análisis celular y molecular de la heterocromatina en Sciara (Díptera Sciaridae)
- Identification of avian W-linked contigs by short-read sequencing
- Ca²⁺/calmodulin-dependent protein kinase II in the cockroach Periplaneta americana: identification of five isoforms and their tissues distribution.
- Phylogenetic analysis and expression patterns of Pax genes in the onychophoran Euperipatoides rowelli reveal a novel bilaterian Pax subfamily
- Point mutations in the sodium channel gene conferring tau-fluvalinate resistance in Varroa destructor.
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