Mechanical force releases nascent chain–mediated ribosome arrest in vitro and in vivo

Keywords

Humanities, Psychology, Sociology, Art

References

• Translation Elongation Factor EF-P Alleviates Ribosome Stalling at Polyproline StretchesSusanne Ude, Jürgen Lassak, Agata L. Starosta — 2013
• Ligand-Dependent Equilibrium Fluctuations of Single Calmodulin MoleculesJan Philipp Junker, Fabian Ziegler, Matthias Rief — 2009
• PUROMYCIN INHIBITION OF PROTEIN SYNTHESIS: INCORPORATION OF PUROMYCIN INTO PEPTIDE CHAINS.Daniel Nathans — 1964
• Timing is everything: unifying codon translation rates and nascent proteome behavior.Daniel A. Nissley, Edward P. O’Brien — 2014
• Theory, analysis, and interpretation of single-molecule force spectroscopy experimentsOlga K. Dudko, Gerhard Hummer, Attila Szabó — 2008
• Genetically encoded but nonpolypeptide prolyl-tRNA functions in the A site for SecM-mediated ribosomal stall.Hiroki Muto, Hitoshi Nakatogawa, Koreaki Ito — 2006
• The dynamics of SecM-induced translational stallingAlbert Tsai, Guy Kornberg, Magnus Johansson — 2014
• The geometry of the ribosomal polypeptide exit tunnel.Neil Voss, Mark Gerstein, Thomas A. Steitz — 2006
• Mechanisms of SecM-mediated stalling in the ribosome.James C. Gumbart, Eduard Schreiner, Daniel N. Wilson — 2012
• The ribosomal tunnel as a functional environment for nascent polypeptide folding and translational stalling.Daniel N. Wilson, Roland Beckmann — 2011
• Single-molecule protein unfolding and translocation by an ATP-fueled proteolytic machineMarie‐Eve Aubin‐Tam, Adrian O. Olivares, Robert T. Sauer — 2011
• Models for the specific adhesion of cells to cells.George I. Bell — 1978
• Correlated conformational events in EF-G and the ribosome regulate translocationJames B. Munro, Michael Wasserman, Roger B Altman — 2010
• Identification of a SecM segment required for export‐coupled release from elongation arrestKenta Nakamori, Shinobu Chiba, Koreaki Ito — 2014
• The Ribosome Modulates Nascent Protein FoldingChristian Kaiser, Daniel Goldman, John D. Chodera — 2011
• ClpX(P) Generates Mechanical Force to Unfold and Translocate Its Protein SubstratesRodrigo A. Maillard, Gheorghe Chistol, Maya Sen — 2011
• Hsp70 chaperones accelerate protein translocation and the unfolding of stable protein aggregates by entropic pulling.Paolo De Los Rios, Anat Ben‐Zvi, Olga Slutsky — 2006
• The ribosomal exit tunnel functions as a discriminating gate.Hitoshi Nakatogawa, Koreaki Ito — 2002
• Widespread regulation of translation by elongation pausing in heat shockReut Shalgi, Jessica A. Hurt, Irina Krykbaeva — 2013
• Nascent peptides that block protein synthesis in bacteriaChristopher J. Woolstenhulme, Shankar P. Parajuli, David Healey — 2013

Cited by

• Probing the structural dynamics of proteins and nucleic acids with optical tweezersDustin B. Ritchie, Michael T. Woodside — 2015
• Dwell-Time Distribution, Long Pausing and Arrest of Single-Ribosome Translation through the mRNA DuplexPing Xie — 2015
• Cotranslational Protein Folding inside the Ribosome Exit TunnelOla B. Nilsson, Rickard Hedman, Jacopo Marino — 2015
• The delicate dance of translation and foldingJoseph D. Puglisi — 2015
• Dynamics of peptide chains during co-translational translocation, membrane integration a domain foldingRickard Hedman — 2015
• Nascent chain-monitored remodeling of the Sec machinery for salinity adaptation of marine bacteriaEiji Ishii, Shinobu Chiba, Narimasa Hashimoto — 2015
• Insights into Cotranslational Nascent Protein Behavior from Computer Simulations.Fabio Trovato, Edward P. O’Brien — 2016
• Coupling of mRNA structure rearrangement to ribosome movement during bypassing of non-coding regionsJin Chen, Arthur Coakley, Michelle O’Connor — 2015
• Physical Origins of Codon Positions That Strongly Influence Cotranslational Folding: A Framework for Controlling Nascent-Protein Folding.Ajeet K. Sharma, Bernd Bukau, Edward P. O’Brien — 2016
• Integrated in vivo and in vitro nascent chain profiling reveals widespread translational pausingYuhei Chadani, Tatsuya Niwa, Shinobu Chiba — 2016
• Small protein domains fold inside the ribosome exit tunnelJacopo Marino, Gunnar von Heijne, Roland Beckmann — 2016
• Trigger Factor Reduces the Force Exerted on the Nascent Chain by a Cotranslationally Folding Protein.Ola B. Nilsson, Annika Müller-Lucks, Günter Krämer — 2016
• −1 Programmed Ribosomal Frameshifting as a Force-Dependent ProcessKoen Visscher — 2016
• Elongation factor 4 remodels the A-site tRNA on the ribosomeMatthieu G. Gagnon, Jinzhong Lin, Thomas A. Steitz — 2016
• Mechano-adaptive sensory mechanism of α-catenin under tensionKoichiro Maki, Sung-Woong Han, Yoshinori Hirano — 2016
• Parallel computation of genome-scale RNA secondary structure to detect structural constraints on human genomeRisa Karakida Kawaguchi, Hisanori Kiryu — 2016
• A simple DNA handle attachment method for single molecule mechanical manipulation experimentsDuyoung Min, Mark A. Arbing, Robert E. Jefferson — 2016
• Recoding: reprogrammed genetic decoding with an emphasis on antizyme regulatory frameshiftingMartina M. Yordanova — 2016
• Strolling Toward New Concepts.Koreaki Ito — 2016
• Role of mRNA structure in the control of protein foldingGuilhem Faure, Aleksey Y. Ogurtsov, Svetlana A. Shabalina — 2016

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