Mapping of pigmentation QTL on an anchored genome assembly of the cichlid fish, Metriaclima zebra
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Summary
This study crossed two species, Metriaclima zebra and M. mbenjii, that differ in several aspects of their body and fin color, and identified quantitative trait loci (QTL) associated with the pigmentation traits of interest.
- Type
- article
- Published
- 2013-04-27
- Cited by
- 47
- References
- 29
- Access
- Open access
- OpenAlex
- https://openalex.org/W23622422
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:8300618
Keywords
Reading (process), Mathematics education, Computer science, Psychology, Pedagogy
References
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- Effect of Astaxanthin on the Pigmentation of Goldfish Carassius auratus
- The genetic architecture of male colour differences between a sympatric Lake Malawi cichlid species pair
- Genetics of male nuptial colour divergence between sympatric sister species of a Lake Victoria cichlid fish
- TRP-ing up melanophores: TRPM7, melanin synthesis, and pigment cell survival.
- Somatolactin selectively regulates proliferation and morphogenesis of neural-crest derived pigment cells in medaka.
- Not just black and white: pigment pattern development and evolution in vertebrates
- Melanophore sublineage-specific requirement for zebrafish touchtone during neural crest development.
- Rapid and cost-effective polymorphism identification and genotyping using restriction site associated DNA (RAD) markers.
- A small number of genes underlie male pigmentation traits in Lake Malawi cichlid fishes.
- A high-resolution map of the Nile tilapia genome: a resource for studying cichlids and other percomorphs
- R/qtl: QTL Mapping in Experimental Crosses
- Genetic basis of male colour dimorphism in a Lake Tanganyika cichlid fish
- Pigment cell signalling for physiological color change.
- A Second-Generation Genetic Linkage Map of Tilapia (Oreochromis spp.) Sequence data from this article have been deposited with the EMBL/GenBank data libraries under accession nos. G68180, G68324 and BV005269, BV005594.
Cited by
- Behavior-dependent cis regulation reveals genes and pathways associated with bower building in cichlid fishes
- The genetic basis of pigment pattern differentiation in Lake Malawi African cichlids
- Quantitative Genetic Analyses of Male Color Pattern and Female Mate Choice in a Pair of Cichlid Fishes of Lake Malawi, East Africa
- Carotenoid-based coloration in cichlid fishes
- Genetic mapping of horizontal stripes in Lake Victoria cichlid fishes: benefits and pitfalls of using RAD markers for dense linkage mapping
- Complex histories of repeated gene flow in Cameroon crater lake cichlids cast doubt on one of the clearest examples of sympatric speciation
- An improved genome reference for the African cichlid, Metriaclima zebra
- The evolutionary genomics of cichlid fishes: explosive speciation and adaptation in the postgenomic era.
- An integrated linkage map reveals candidate genes underlying adaptive variation in Chinook salmon (Oncorhynchus tshawytscha)
- Adenylate cyclase 5 is required for melanophore and male pattern development in the guppy (Poecilia reticulata)
- Genetic basis of continuous variation in the levels and modular inheritance of pigmentation in cichlid fishes
- Origin and evolution of B chromosomes in the cichlid fish Astatotilapia latifasciata based on integrated genomic analyses.
- Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake
- Genetic mapping and quantitative trait loci analysis of growth-related traits in the small abalone Haliotis diversicolor using restriction-site-associated DNA sequencing
- Polygenic sex determination in the cichlid fish Astatotilapia burtoni
- The genetic architecture of novel trophic specialists: larger effect sizes are associated with exceptional oral jaw diversification in a pupfish adaptive radiation
- Genetic dissection of adaptive form and function in rapidly speciating cichlid fishes
- Body shape differences in a pair of closely related Malawi cichlids and their hybrids: Effects of genetic variation, phenotypic plasticity, and transgressive segregation
- Genetic architectures of larval pigmentation and color pattern in the redheaded pine sawfly (Neodiprion lecontei)
- Correction to: Hybrid sterility increases with genetic distance in snubnose darters (Percidae: Etheostoma)
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