A Comprehensive Map of Mobile Element Insertion Polymorphisms in Humans
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Summary
A direct comparison of MEI and SNP diversity levels suggests a differential mobile element insertion rate among populations, and a comprehensive map of 7,380 MEI polymorphisms from the 1000 Genomes Project whole-genome sequencing data is presented.
- Type
- article
- Published
- 2011-08-01
- Cited by
- 313
- References
- 79
- Access
- Open access
- OpenAlex
- https://openalex.org/W21876680
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:14209184
Keywords
Computer science
References
- Base-calling of automated sequencer traces using phred. I. Accuracy assessment.
- Principles of population genetics
- Initial sequence of the chimpanzee genome and comparison with the human genome
- Mutation analysis in the BRCA2 gene in primary breast cancers
- SVA elements are nonautonomous retrotransposons that cause disease in humans.
- Evolutionary Rate at the Molecular Level
- An initial map of insertion and deletion (INDEL) variation in the human genome.
- Accurate Whole Human Genome Sequencing using Reversible Terminator Chemistry
- Statistical properties of segregating sites.
- Alu repeat discovery and characterization within human genomes.
- Mobile Interspersed Repeats Are Major Structural Variants in the Human Genome
- Whole-genome resequencing allows detection of many rare LINE-1 insertion alleles in humans.
- Evolutionary history of 7SL RNA-derived SINEs in Supraprimates.
- Progress in understanding the biology of the human mutagen LINE‐1
- Clustering With Local Equivalence Relations
- Mapping and sequencing of structural variation from eight human genomes
- LINE-1 Retrotransposition Activity in Human Genomes
- Recent common ancestry of human Y chromosomes: evidence from DNA sequence data.
- Recently mobilized transposons in the human and chimpanzee genomes.
- The regulated retrotransposon transcriptome of mammalian cells
Cited by
- Transposable element polymorphisms recapitulate human evolution
- Mechanisms of disease-associated SINE-VNTR-Alus
- Genome-wide transposon analyses: annotation, movement and impact on plant function and evolution
- Inherited and de novo variation in human genomes
- Transposable elements in response to environmental stressors
- PopAlu: population-scale discovery of Alu polymorphisms
- Detecting de novo mutations in intellectual disability.
- Generating bioinformatic resources for L1-dependent retrotransposons
- The Challenge of Next Generation Sequencing in the Context of Neuromuscular Diseases
- Read count-based method for high-throughput allelic genotyping of transposable elements and structural variants
- Computational methods for efficient exome sequencing-based genetic testing
- Retrotransposon mobilization in cancer genomes
- Contrasting mechanisms of de novo copy number mutagenesis suggest the existence of different classes of environmental copy number mutagens
- Somatic retrotransposition in the cancer genome
- An integrated map of structural variation in 2,504 human genomes
- Alu elements: know the SINEs
- Identification of human-specific AluS elements through comparative genomics.
- Mobile DNA elements in the generation of diversity and complexity in the brain
- Properties and rates of germline mutations in humans
- PeSV-Fisher: Identification of Somatic and Non-Somatic Structural Variants Using Next Generation Sequencing Data
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