Characterization and phylogenetic analysis of the complete chloroplast genome of Ophiorrhiza pumila (Rubiaceae)
Explore this paper's citation graph
Summary
Phylogenetic analysis suggested that O. pumila is sister to a highly supported clade composed of 10 species including Morinda officinalis, Gynochthodes cochinchinensis, Saprosma merrillii, Hedyotis ovata and Galium mollugo.
- Type
- article
- Published
- 2021-06-14
- Cited by
- 2
- References
- 16
- Access
- Open access
- OpenAlex
- https://openalex.org/W3166113202
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:235633100
Keywords
Biology, Phylogenetic tree, Botany, Rubiaceae, Genome
References
- Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
- SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- NOVOPlasty: de novo assembly of organelle genomes from whole genome data
- IRscope: an online program to visualize the junction sites of chloroplast genomes
- MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.
- Complete Chloroplast Genome of Cercis chuniana (Fabaceae) with Structural and Genetic Comparison to Six Species in Caesalpinioideae
- Comparative chloroplast genomes of Paris Sect. Marmorata: insights into repeat regions and evolutionary implications
- Characterization of Withania somnifera chloroplast genome and its comparison with other selected species of Solanaceae.
- Plastid genomics of Nicotiana (Solanaceae): insights into molecular evolution, positive selection and the origin of the maternal genome of Aztec tobacco (Nicotiana rustica)
- Ethanol extract of Ophiorrhiza pumila suppresses liver cancer cell proliferation and migration
- Comparative Plastomics of Ashwagandha (Withania, Solanaceae) and Identification of Mutational Hotspots for Barcoding Medicinal Plants
- Genus Ophiorrhiza: A Review of Its Distribution, Traditional Uses, Phytochemistry, Biological Activities and Propagation
- Effects of Concentration and Temperature of Nutrient Solution on Growth and Camptothecin Accumulation of Ophiorrhiza pumila
- The transcription factor OpWRKY2 positively regulates the biosynthesis of the anticancer drug camptothecin in Ophiorrhiza pumila
Cited by
Related papers
- Galium shinasii (Rubiaceae): a new species of Galium L. from Eastern Turkey
- The Galium obtusum Group (Galium sect. Aparinoides, Rubiaceae)
- A new species of Galium (Rubiaceae) from northeastern Mexico
- The Genus Galium (Rubiaceae) in Oklahoma
- Materials for Chinese Galium L. (Rubiaceae)
- Galium suecicum (Rubiaceae), a New and Relict Species in the Flora of Poland
- The morphological study of Galium L. (Rubiaceae) in Korea
- THE FLESHY-FRUITED GALIUM SPECIES OF CALIFORNIA (RUBIACEAE). I. CYTOLOGICAL FINDINGS AND SOME TAXONOMIC CONCLUSIONS
- A NEW GYPSOPHILIC SPECIES OF GALIUM (RUBIACEAE) FROM NORTH-CENTRAL MEXICO
- The Distribution of Galium L. (Rubiaceae) in Africa South of the Sahara