Genomic prediction using a reference population of multiple pure breeds and admixed individuals
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Summary
This study aimed at providing methodologies for the use of data from crossbred individuals with an admixed genetic background together with data from multiple pure breeds, for the purpose of genomic evaluations for both purebred and crossbred animals.
- Type
- article
- Published
- 2021-05-31
- Cited by
- 50
- References
- 67
- Access
- Open access
- OpenAlex
- https://openalex.org/W3164097719
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:235260293
Keywords
Purebred, Crossbreed, Breed, Biology, Population
References
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- Reliability of Genomic Predictions Across Multiple Populations
- Extension of the bayesian alphabet for genomic selection
- Mapping genes for complex traits in domestic animals and their use in breeding programmes
- Genome position specific priors for genomic prediction
- Invited review: crossbreeding in dairy cattle: a Danish perspective.
- Multibreed genomic evaluations using purebred Holsteins, Jerseys, and Brown Swiss.
- Linkage Disequilibrium and Persistence of Phase in Holstein–Friesian, Jersey and Angus Cattle
Cited by
- Efficiency of blood “refreshing” method in cattle pure breeding of the Simmental breed
- Breed of origin of alleles and genomic predictions for crossbred dairy cows
- Genomic evaluation with multibreed and crossbred data
- Genomic prediction in Nordic Red dairy cattle considering breed origin of alleles.
- Genomic predictions for crossbred dairy cows by combining solutions from purebred evaluation based on breed origin of alleles.
- Improving the Accuracy of Multi-Breed Prediction in Admixed Populations by Accounting for the Breed Origin of Haplotype Segments
- 272. Accuracy of prediction for a genomic evaluation in rotational crossbreeding scheme (Montbéliarde × Holstein × Red Danish)
- Genome‐wide marker effect heterogeneity is associated with a large effect dormancy locus in winter malting barley
- Local breed proportions and local breed heterozygosity in genomic predictions for crossbred dairy cows.
- The effect of high-density genotypic data and different methods on joint genomic prediction: A case study in large white pigs.
- Fitting Genomic Prediction Models with Different Marker Effects among Prefectures to Carcass Traits in Japanese Black Cattle
- 330. Including local genomic breed proportions in genomic predictions for crossbred
- 342. Breed-origin-of-alleles approach using summary statistics for multi-breed genomic prediction in dairy cattle
- 341. Genomic prediction in multi-breed Irish beef cattle population using a breed origin of alleles model
- 174. Genomic prediction using breed origin of alleles model accounting for probabilities in the assignment of the alleles
- Population genomics of American mink using genotype data
- Improving the accuracy of genomic prediction for meat quality traits using whole genome sequence data in pigs
- A breed-of-origin of alleles model that includes crossbred data improves predictive ability for crossbred animals in a multi-breed population
- Multibreed genomic prediction using summary statistics and a breed-origin-of-alleles approach
- Segregation between breeds and local breed proportions in genetic and genomic models for crossbreds
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