Pan-genome study of Thermococcales reveals extensive genetic diversity and genetic evidence of thermophilic adaption.
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Summary
The pan-genome architecture of 30 Thermococcales species was characterized to gain insight into their genetic properties, evolutionary patterns, and specific metabolisms adapted to niches and provided valuable research models for studying the metabolic traits of early life forms.
- Type
- article
- Published
- 2020-09-17
- Cited by
- 11
- References
- 71
- OpenAlex
- https://openalex.org/W3087615472
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:221770908
Keywords
Biology, Genome, Gene, Genetics, Functional divergence
References
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- Estimating maximum likelihood phylogenies with PhyML.
- Comparative genomics reveals conserved positioning of essential genomic clusters in highly rearranged Thermococcales chromosomes
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- Biogeography and evolution of Thermococcus isolates from hydrothermal vent systems of the Pacific
- Comparison of prokaryotic diversity at offshore oceanic locations reveals a different microbiota in the Mediterranean Sea.
- Bacterial motility: links to the environment and a driving force for microbial physics.
- A molecular and physiological survey of a diverse collection of hydrothermal vent Thermococcus and Pyrococcus isolates
- Recent developments in the thermophilic microbiology of deep-sea hydrothermal vents
- Biochemical and phylogenetic characterization of two novel deep-sea Thermococcus isolates with potentially biotechnological applications
- Mutational Analyses of the Enzymes Involved in the Metabolism of Hydrogen by the Hyperthermophilic Archaeon Pyrococcus furiosus
- Extremely thermophilic microorganisms and their polymer-hidrolytic enzymes
- Biochemical and phylogenetic characterization of a novel terrestrial hyperthermophilic archaeon pertaining to the genus Pyrococcus from an Algerian hydrothermal hot spring
- Molecular diversity of Thermococcales isolated from Guaymas Basin hydrothermal vents
- Structural features of thermozymes.
- Isolation and characterization of Thermococcus sibiricus sp. nov. from a Western Siberia high-temperature oil reservoir
- OrthoMCL: identification of ortholog groups for eukaryotic genomes.
- Diversity of CRISPR systems in the euryarchaeal Pyrococcales
- Palaeococcus ferrophilus gen. nov., sp. nov., a barophilic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney.
Cited by
- Comparative Genomics of Pseudomonas stutzeri Complex: Taxonomic Assignments and Genetic Diversity
- Comparative Genomic Analyses of the Genus Nesterenkonia Unravels the Genomic Adaptation to Polar Extreme Environments
- A review of the pangenome: how it affects our understanding of genomic variation, selection and breeding in domestic animals?
- Comparative genomics of Fervidobacterium: a new phylogenomic landscape of these wide-spread thermophilic anaerobes
- Metagenomic analysis of the faecal microbiota and AMR in roe deer in Western Pomerania
- Ortholog Analysis and Transformation of Glycoside Hydrolase Genes in Hyperthermophilic Archaeal Thermococcus Species
- Chemodiversity of dissolved organic matter in produced water correlates with the microbial community in fifteen shale gas wells
- Pan-genome analysis of Morganella morganii reveals niche-specific selection of functional traits: friend or foe?
- Pan-genome analysis of Morganella Morganii reveals niche-specific selection of functional traits: Friend or Foe?
- Astrobiology of life on Earth.
- The pangenome: a statistical model, not a fixed biological property
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