ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees

Keywords

Tree (set theory), Set (abstract data type), Genome, Coalescent theory, Computer science

References

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Cited by

• Exploring data processing strategies in NGS target enrichment to disentangle radiations in the tribe Cardueae (Compositae).Осипов Олег Сергеевич — 2018
• Optimized DNA extraction and library preparation for minute arthropods: Application to target enrichment in chalcid wasps used for biocontrolBad — 2019
• A customized nuclear target enrichment approach for developing a phylogenomic baseline for Dioscorea yams (Dioscoreaceae)Н. И. Оболонкова, В. Ф. Каменев — 2019
• Topological metrizations of trees, and new quartet methods of tree inferenceJohn A. Rhodes — 2017
• Three New Genome Assemblies Support a Rapid Radiation in Musa acuminata (Wild Banana)Mathieu Rouard, Gaëtan Droc, Guillaume Martin — 2018
• Revisiting the phylogeny of Ficus (Moraceae): When Next Generation Sequencing corroborates Past Generation BotanistsJean–Yves Rasplus, Lillian Jennifer Rodriguez, Christine Tollon‐Cordet — 2018
• Fern genomes elucidate land plant evolution and cyanobacterial symbiosesFay‐Wei Li, Paul Brouwer, Lorenzo Carretero‐Paulet — 2018
• Impacts of Inference Method and Data set Filtering on Phylogenomic Resolution in a Rapid Radiation of Ground Squirrels (Xerinae: Marmotini)Bryan S. McLean, Kayce C. Bell, Julie M. Allen — 2018
• Optimised DNA extraction and library preparation for minute arthropods: application to target enrichment in chalcid wasps used for biocontrolAstrid Cruaud, Sabine Nidelet, Pierre Arnal — 2018
• INSTRAL: Discordance-aware Phylogenetic Placement using Quartet ScoresMaryam Rabiee, Siavash Mirarab — 2018
• Multi-allele species reconstruction using ASTRALMaryam Rabiee, Erfan Sayyari, Siavash Mirarab — 2018
• Incomplete lineage sorting rather than hybridization explains the inconsistent phylogeny of the wisentKun Wang, Johannes A. Lenstra, Liang Liu — 2018
• Phylotranscriptomic Insights into the Diversification of Endothermic Thunnus TunasAdam Ciezarek, Owen G. Osborne, Oliver N. Shipley — 2018
• Phylogeny of the Australian Solanum dioicum group using seven nuclear genes, with consideration of Symon’s fruit and seed dispersal hypothesesChristopher T. Martine, Ingrid Jordon‐Thaden, Angela McDonnell — 2019
• Phylogenomic Signatures of Ancient Introgression in a Rogue Lineage of Darters (Teleostei: Percidae)Daniel J. MacGuigan, Thomas J. Near — 2018
• Pseudogenization and Resurrection of a Speciation Gene.Korinna Esfeld, Andrea E. Berardi, Michel Moser — 2018
• Why phylogenomic uncertainty enhances introgression analysesJames B. Pease — 2018
• Phylogenomics from low‐coverage whole‐genome sequencingFeng Zhang, Yinhuan Ding, Chao‐Dong Zhu — 2019
• Characterizing gene tree conflict in plastome-inferred phylogeniesJoseph F. Walker, Nathanael Walker‐Hale, Oscar M. Vargas — 2019
• Evolutionary history of Polyneoptera and its implications for our understanding of early winged insectsBenjamin Wipfler‍, Harald Letsch, Paul B. Frandsen — 2019

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