Integrated omics analyses of retrograde signaling mutant delineate interrelated stress response strata
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Summary
These integrated multi-omic analyses provided a vehicle to gain an in-depth knowledge of genome-metabolism interactions, and to further probe the extent of these interactions and delineate their functional contributions.
- Type
- article
- Published
- 2017-04-29
- Cited by
- 34
- References
- 110
- Access
- Open access
- OpenAlex
- https://openalex.org/W2601477564
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:31717511
Keywords
Biology, Retrograde signaling, Metabolomics, Transcriptome, Signal transduction
References
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- Retrograde signaling by the plastidial metabolite MEcPP regulates expression of nuclear stress-response genes.
- Integrative analysis of transcript and metabolite profiling data sets to evaluate the regulation of biochemical pathways during photomorphogenesis.
- A Novel Class of Oxylipins,sn1-O-(12-Oxophytodienoyl)-sn2-O-(hexadecatrienoyl)-monogalactosyl Diglyceride, from Arabidopsis thaliana *
Cited by
- Initiation of ER Body Formation and Indole Glucosinolate Metabolism by the Plastidial Retrograde Signaling Metabolite, MEcPP
- The role of retrograde signals during plant stress responses.
- Integrative omics analysis of p53‐dependent regulation of metabolism
- Abiotic stress-induced chloroplast proteome remodelling: a mechanistic overview.
- Interplay of the two ancient metabolites auxin and MEcPP regulates adaptive growth
- The Arabidopsis SAL1-PAP Pathway: A Case Study for Integrating Chloroplast Retrograde, Light and Hormonal Signaling in Modulating Plant Growth and Development?
- New insights into the biosynthesis of esterified oxylipins and their involvement in plant defense and developmental mechanisms
- Chloroplasts as mediators of plant biotic interactions over short and long distances.
- Orthogonal regulation of phytochrome B abundance by stress-specific plastidial retrograde signaling metabolite
- Retrograde induction of phyB orchestrates ethylene-auxin hierarchy to regulate growth
- Integrated analysis of transcriptomic and metabolomic profiling reveal the p53 associated pathways underlying the response to ionizing radiation in HBE cells
- Chloroplast-associated molecular patterns as concept for fine-tuned operational retrograde signalling
- Retrograde Induction of phyB Orchestrates Ethylene-Auxin Hierarchy to Regulate Growth1[OPEN]
- MicroRNA156 (miR156) Negatively Impacts Mg-Protoporphyrin IX (Mg-Proto IX) Biosynthesis and Its Plastid-Nucleus Retrograde Signaling in Apple
- Systematic Multi-Omics Integration (MOI) Approach in Plant Systems Biology
- Tanned or Sunburned: How Excessive Light Triggers Plant Cell Death.
- Organelles-nucleus-plasmodesmata signaling (ONPS): an update on its roles in plant physiology, metabolism and stress responses.
- The MEP-pathway genes are polyphyletic origin and evolutionary conserved
- The eukaryotic MEP-pathway genes are evolutionarily conserved and originated from Chlaymidia and cyanobacteria
- The Thiamin-Requiring 3 Mutation of Arabidopsis 5-Deoxyxylulose-Phosphate Synthase 1 Highlights How the Thiamin Economy Impacts the Methylerythritol 4-Phosphate Pathway
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