Synthetic microbial ecology and the dynamic interplay between microbial genotypes.
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Summary
It is proposed that distinguishing between active and passive interactions and accounting for the pervasiveness of competition can improve existing frameworks for designing and predicting the dynamics of microbial assemblages.
- Type
- review
- Published
- 2016-11-01
- Cited by
- 89
- References
- 167
- Access
- Open access
- OpenAlex
- https://openalex.org/W2512750018
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:981252
Keywords
Ecology, Microbial ecology, Biology, Microbial population biology, Community
References
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- LESS IS MORE: SELECTIVE ADVANTAGES CAN EXPLAIN THE PREVALENT LOSS OF BIOSYNTHETIC GENES IN BACTERIA
- Synthetic microbial ecosystems: an exciting tool to understand and apply microbial communities.
- Diversity peaks at intermediate productivity in a laboratory microcosm
- Predator-Prey Interactions of Dictyostelium discoideum and Escherichia coli in Continuous Culture
- Cyanate as energy source for nitrifiers
- Heading in the right direction: thermodynamics-based network analysis and pathway engineering.
- COEXISTENCE OF EVOLVING BACTERIA STABILIZED BY A SHARED BLACK QUEEN FUNCTION
- daime, a novel image analysis program for microbial ecology and biofilm research.
- Genetic engineering of multispecies microbial cell factories as an alternative for bioenergy production.
- Long-Term Experimental Evolution in Escherichia coli. I. Adaptation and Divergence During 2,000 Generations
Cited by
- Resolving Species Level Changes in a Representative Soil Bacterial Community Using Microfluidic Quantitative PCR
- Cooperation in carbon source degradation shapes spatial self-organization of microbial consortia on hydrated surfaces
- Ecological Insights into the Dynamics of Plant Biomass-Degrading Microbial Consortia.
- Bacterial Synergism in Lignocellulose Biomass Degradation – Complementary Roles of Degraders As Influenced by Complexity of the Carbon Source
- Biophysical processes supporting the diversity of microbial life in soil
- Metabolite toxicity slows local diversity loss during expansion of a microbial cross-feeding community
- Modeling Microbial Communities: A Call for Collaboration between Experimentalists and Theorists
- Label-Free Proteomics of a Defined, Binary Co-culture Reveals Diversity of Competitive Responses Between Members of a Model Soil Microbial System
- Production of chemicals using dynamic control of metabolic fluxes.
- A Synthetic Community System for Probing Microbial Interactions Driven by Exometabolites
- Coevolution of Saccharomyces cerevisiae and Lactobacillus plantarum : engineering interspecies cooperation
- Engineered yeast and microalgae mutualisms: Synthetic ecology applied to species isolated from winery wastewater
- Construction and Characterization of Synthetic Bacterial Community for Experimental Ecology and Evolution
- Biotransformation of 2,4‐dinitrotoluene in a phototrophic co‐culture of engineered Synechococcus elongatus and Pseudomonas putida
- Early Changes in Nutritional Conditions Affect Formation of Synthetic Mutualism Between Chlorella sorokiniana and the Bacterium Azospirillum brasilense
- Microbial degradation of plastic : comparison of synthetic and natural communities
- Analysis of productivity and stability of synthetic microbial communities
- Synthetic Mutualism and the Intervention Dilemma
- The rate of environmental fluctuations shapes ecological dynamics in a two-species microbial system.
- Nutrient Exchange of Carbon and Nitrogen Promotes the Formation of Stable Mutualisms Between Chlorella sorokiniana and Saccharomyces cerevisiae Under Engineered Synthetic Growth Conditions
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