SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building.
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Summary
SeaView version 4 combines all the functions of the widely used programs SeaView and Phylo_win, and expands them by adding network access to sequence databases, alignment with arbitrary algorithm, maximum-likelihood tree building with PhyML, and display, printing, and copy-to-clipboard of rooted or unrooted, binary or multifurcating phylogenetic trees.
- Type
- letter
- Published
- 2010-02-01
- Cited by
- 5,760
- References
- 25
- Access
- Open access
- OpenAlex
- https://openalex.org/W2149531726
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:15686784
Keywords
Phylogenetic tree, Biology, Tree (set theory), Sequence (biology), Graphical user interface
References
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- CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
- Remote access to ACNUC nucleotide and protein sequence databases at PBIL.
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- NEXUS: an extensible file format for systematic information.
- A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.
- MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.
- MUSCLE: multiple sequence alignment with high accuracy and high throughput.
- Clustal W and Clustal X version 2.0
- ProbCons: Probabilistic consistency-based multiple sequence alignment.
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