Genomic insights that advance the species definition for prokaryotes.
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Summary
The average nucleotide identity of the shared genes between two strains was found to be a robust means to compare genetic relatedness among strains, and that ANI values of approximately 94% corresponded to the traditional 70% DNA-DNA reassociation standard of the current species definition.
- Type
- article
- Published
- 2005-02-15
- Cited by
- 2,032
- References
- 33
- Access
- Open access
- OpenAlex
- https://openalex.org/W2134375163
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:12888084
Keywords
Biology, Genome, Gene, Genetics, Organism
References
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- Intra- and Interspecific Variation in Primate Gene Expression Patterns
- What are bacterial species?
- Determination of 16S rRNA sequences of Streptococcus mitis and Streptococcus gordonii and phylogenetic relationships among members of the genus Streptococcus.
- Variation in gene expression within and among natural populations
- Identification of anthrax toxin genes in a Bacillus cereus associated with an illness resembling inhalation anthrax.
- Traces of Human Migrations in Helicobacter pylori Populations
- Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes
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- Biogeography: An Emerging Cornerstone for Understanding Prokaryotic Diversity, Ecology, and Evolution
- Species delineation and clonal diversity in four Bifidobacterium species as revealed by multilocus sequencing.
- Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. nov.
- Reclassification of Deinococcus xibeiensis Wang et al. 2010 as a heterotypic synonym of Deinococcus wulumuqiensis Wang et al. 2010.
- Comparison of Xenorhabdus bovienii bacterial strain genomes reveals diversity in symbiotic functions
- Differential Functional Constraints Cause Strain-Level Endemism in Polynucleobacter Populations
- Pseudomonas canadensis sp. nov., a biological control agent isolated from a field plot under long-term mineral fertilization
- Whole-Genome Sequences of Xanthomonas euvesicatoria Strains Clarify Taxonomy and Reveal a Stepwise Erosion of Type 3 Effectors
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- Neonatal oral fluid as a transmission route for bifidobacteria to the infant gut immediately after birth
- Fundicoccus fermenti sp. nov., an indigo-reducing facultative anaerobic alkaliphile isolated from indigo fermentation liquor used for dyeing.
- A phylogenetic potpourri: computational methods for analysing genome scale data
- Ecological Divergence Among Extremely Close Relatives in Bacillus
- The relationship between current speed and shell morphology in the freshwater snail, Elimia livescens, in two northern Michigan streams.
- PCR detection of Streptococcus pneumoniae and Haemophilus influenzae in pneumonia patients
- POLYPHASIC ANALYSES ON THE NATURAL ECOLOGY OF HUMAN PATHOGENS
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