Phylogenetic analysis in molecular evolutionary genetics.

Keywords

Phylogenetic tree, Maximum parsimony, Biology, Phylogenetics, Evolutionary biology

References

• Protein-based phylogenies support a chimeric origin for the eukaryotic genome.Rafael Salas Jiménez — 1995
• Eutherian phylogeny as inferred from mitochondrial DNA sequence data.Ying Cao, Jun Adachi, Masami Hasegawa — 1994
• A discrete Fourier analysis for evolutionary trees.C. Edelman — 1994
• Lens crystallins: gene recruitment and evolutionary dynamism.Francisco Javier Escobar Borrego — 1993
• Molecular Evolutionary GeneticsMasatoshi Nei — 1987
• A mammalian molecular clock?Simon Easteal — 1992
• Phylogenetic analysis: concepts and methods.Kenneth K. Kídd, Laura A. Sgaramella-Zonta — 1971
• Unbiased estimation of evolutionary distance between nucleotide sequences.Fumio Tajima — 1993
• A note on Sattath and Tversky's, Saitou and Nei's, and Studier and Keppler's algorithms for inferring phylogenies from evolutionary distances.Olivier Gascuel — 1994
• Phylogeny determination using dynamically weighted parsimony method.Patrick Williams, Walter M. Fitch — 1990
• A Simple Method to Improve the Reliability of Tree ReconstructionsMichael Schöniger, Arndt von Haeseler — 1993
• Estimation of evolutionary distance for reconstructing molecular phylogenetic trees.Fumio Tajima, Naoko Takezaki — 1994
• Phylogenetic relationships in Drosophila: a conflict between molecular and morphological data.Richard H. Thomas, John A. Hunt — 1993
• A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates.Mary K. Kuhner, Joseph Felsenstein — 1994
• Theoretical foundation of the minimum-evolution method of phylogenetic inference.Andrey Rzhetsky, M Nei — 1993
• A generalized least-squares estimate for the origin of sporophytic self-incompatibility.Marcy K. Uyenoyama — 1995
• Molecular phylogeny and divergence times of drosophilid species.C. Russo, Naoko Takezaki, M Nei — 1995
• Cases in which Parsimony or Compatibility Methods will be Positively MisleadingJoe Felsenstein — 1978
• MINIMUM MUTATION FITS TO A GIVEN TREEJ. A. Hartigan — 1973
• A Successive Approximations Approach to Character WeightingJames S. Farris — 1969

Cited by

• [Genetic analysis of Y chromosome and mitochondrial DNA poly-morphism of Mulam ethnic group in Guangxi, China].Xiaoqing Wang, Chuan‐Chao Wang, Qiongying Deng — 2013
• Cumacea (Crustacea; Peracarida)of the Antarctic shelf - diversity,biogeography, and phylogenyPeter Rehm — 2007
• Phylogenetic Relationships of Spider Monkeys (Ateles) Based on Mitochondrial DNA VariationAndrew C. Collins, Jean Dubach — 2000
• Biologie moléculaire et phylogenèse des Lémuriformes (Primates de Madagascar)Daniel Montagnon, RUMPLER, Yves — 2001
• Computational and molecular analysis of Myb gene familyCizhong Jiang — 2004
• 淡水藻類分類の一研究者の軌跡"時の流れに身をまかせて"(第9回日本植物分類学会賞受賞記念論文)野崎 久義 — 2010
• Relations phylogénétiques chez les termites du genre Reticulitermes en Europe : description d'une nouvelle espècePaolo Uva — 2002
• Reticulation in evolutionSimone Linz — 2008
• Comparative analysis of metabolic pathwaysJose Carlos Clemente Litran — 2007
• Computational and Evolutionary Analysis of HIV Molecular SequencesAllen G. Rodrigo, Gerald H. Learn — 2001
• Comparison of actinobacterial diversity in Marion Island terrestrial habitatsWalter Sanyika — 2008
• The function of ascorbate oxidase in Arabidopsis thalianaChoon Kiat Lim — 2012
• Variational Methods in Combinatorial Optimization and Phylogeny ReconstructionHenrik Jönsson — 2001
• A contribution to the systematics of the genus Tilia with respect to some hybrids by RAPD analysisHeike Liesebach, Z. Sinkó — 2008
• Collaborative Knowledge Management in the Life Sciences NetworkIngo Paulsen — 2008
• Notice of RetractionComparative study of the nucleotide sequence of MyoG gene between pig and 11 different speciesLi Zhu, Xuewei Li, Shuai Su-rong — 2010
• Identification of ornamental fishes for biosecurityRupert A. Collins — 2012
• The Oriental Colubrine Genus Coelognathus Fitzinger, 1843 and Classification of Old and New World Racers and Ratsnakes (Reptilia, Squamata, Colubridae, Colubrinae)Urs Albert Konstantin Utiger, Beat‏ Schätti, Notker Helfenberger — 2013
• The Molecular Biology of Schizosaccharomyces pombeRichard Egel — 2004
• Molecular genetic, chemotaxonomic, and autecological investigations of European Sericostomatidae (Insecta: Trichoptera)Florian Leese, Rüdiger Wagner, J. Wolfgang Wägele — 2004

Related papers

• Surprising properties of Maximum Parsimony on phylogenetic networksMareike Fischer — 2015
• On the equivalence of Maximum Parsimony and Maximum Likelihood on phylogenetic networksMareike Fischer, Parisa Bazargani — 2015
• Maximum Parsimony for Tree MixturesStefan Grünewald, Vincent Moulton — 2009
• On the quirks of maximum parsimony and likelihood on phylogenetic networks.Christopher Bryant, Mareike Fischer, Simone Linz — 2015
• Genetic algorithm for large-scale maximum parsimony phylogenetic analysis of proteins.Tobias Hill, Andor Lundgren, Robert Fredriksson — 2005
• Reconstructing phylogenetic networks using maximum parsimonyLuay Nakhleh, Guohua Jin, Fangqing Zhao — 2005
• GeneSupport Maximum Gene-Support Tree Approach to Species Phylogeny InferenceYunfeng Shan, Xiu‐Qing Li — 2009