Bioinformatics methods to predict protein structure and function

Keywords

Protein structure database, Protein structure prediction, Protein function prediction, Computer science, Sequence (biology)

References

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• In Silico Design and Analysis of TGFαL3-SEB Fusion Protein as “a New Antitumor Agent” Candidate by Ligand-Targeted Superantigens TechniqueAbbas Ali Imani Fooladi, Forough Yousefi, Seyed Fazloallah Mousavi — 2014
• Studies of genes involved in regulating flowering time in Arabidopsis thalianaMaria A. Svensson — 2006
• Bioinformática: Perspectivas na Medicina Bioinformática: Perspectivas na Medicina Bioinformática: Perspectivas na Medicina Bioinformática: Perspectivas na Medicina Bioinformática: Perspectivas na Medicina Bioinformatics: Perspectives in MedicineGlaucius Oliva — 2008
• In silico analysis of chimeric TF, Omp31 and BP26 fragments of Brucella melitensis for development of a multi subunit vaccine candidateAmir Ghasemi, Reza Ranjbar, Jafar Amani — 2014
• Comparative modelling of protein structure and its impact on microbial cell factoriesNuría B. Centeno, Joan Planas-Iglesias, Baldomero Oliva — 2005
• Computational methods in Bioinformatics: Introduction, Review, and ChallengesMoustafa Elshafei — 2001
• Multiple Sequence Alignment as a Workbench for Molecular Systems BiologyJulie Thompson, Olivier Poch — 2006
• Efficient recognition of protein fold at low sequence identity by conservative application of Psi‐BLAST: applicationFred J. Stevens, C. Kuemmel, G. Babnigg — 2005
• Dissecting Domain-Specific Evolutionary Pressure Profiles of Transient Receptor Potential Vanilloid Subfamily Members 1 to 4Pau Doñate‐Macian, Alex Perálvarez‐Marín — 2014
• Characterization of a randomized FRET library for protease specificity determination.Jonathan F. Fretwell, Shams M. K. Ismail, Jeffrey M. Cummings — 2008
• Structural Analysis of Xylanase from Marine Thermophilic Geobacillus stearothermophilus in Tanjung Api, Poso, IndonesiaBudi Saksono, Linda Sukmarini — 2010
• A consensus procedure improving solvent accessibility predictionGiulio Gianese, Stefano Pascarella — 2006
• Structure of Stearoyl ACP Desaturase of Pistacia Chinensis and Other Plants Was Predicted by Bioinformatics MethodsMing-Wang Shi, Hongwei Song, Jiangtao Zhang — 2009
• ‘Crystal lattice engineering,’ an approach to engineer protein crystal contacts by creating intermolecular symmetry: Crystallization and structure determination of a mutant human RNase 1 with a hydrophobic interface of leucinesHidenori Yamada, Taro Tamada, Megumi Kosaka — 2007
• A comparative study of the reported performance of ab initio protein structure prediction algorithmsGlennie Helles — 2008
• Computational analyses of the components of Sinorhizobium meliloti ExoR-ExoS/ChvI pathway: the ExoR and ExoS proteinsEliza Wiech — 2014
• On computational strategies for regulatory element and regulatory polymorphism detectionStephen B. Montgomery — 2006
• In Silico Design of a Chimeric Protein Containing Antigenic Fragments of Helicobacter pylori; A Bioinformatic ApproachNazanin Mohammad, Mehrnaz Taghipour Karsabet, Jafar Amani — 2016
• Predicting the function of a hypothetical protein from Pyrococcus horikoshii OT3 as HD domain containing metal-dependent phosphohydrolaseP. A. Babu, K. Harshita, V. Prasanth — 2009
• Contribution of Clinical Biochemistry to Structural BioinformaticsHeba M. Afify — 2016

Related papers

• Protein structure prediction and biomolecular recognition: From protein sequence to peptidomimetic design with the human β 3 integrinRita Casadio, Mario Compiani, Antonio Facchiano — 2002
• Prediction of protein structure and function by using bioinformatics.Yvonne J. K. Edwards, Amanda Cottage — 2001
• Database of homology‐derived protein structures and the structural meaning of sequence alignmentChris Sander, Reinhard Schneider — 1991