Phylogenetic Analysis of the Human Gut Microbiota Using 16S rDNA Clone Libraries and Strictly Anaerobic Culture‐Based Methods
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Summary
The human gut microbiota from three healthy subjects were compared by the use of a sequence analysis of 16S rDNA libraries and a culture‐based method and showed marked individual differences in the composition of intestinal microbiota.
- Type
- article
- Published
- 2002-08-01
- Cited by
- 452
- References
- 41
- Access
- Open access
- OpenAlex
- https://openalex.org/W2056373708
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:9411864
Keywords
Biology, Phylotype, 16S ribosomal RNA, Library, Bacteroides
References
- Temperature-gradient gel electrophoresis. Thermodynamic analysis of nucleic acids and proteins in purified form and in cellular extracts.
- 16S/23S rRNA sequencing
- Quantitative fluorescence in situ hybridization of Bifidobacterium spp. with genus-specific 16S rRNA-targeted probes and its application in fecal samples
- Phylogeny of not-yet-cultured spirochetes from termite guts
- Human fecal flora: the normal flora of 20 Japanese-Hawaiians.
- Medium without rumen fluid for nonselective enumeration and isolation of rumen bacteria.
- Phylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park
- Phylogeny of Bacteroides, Prevotella, and Porphyromonas spp. and related bacteria
- Fusobacterium prausnitzii and related species represent a dominant group within the human fecal flora.
- Phylogenetic and phenotypic evidence for the transfer of Eubacterium aerofaciens to the genus Collinsella as Collinsella aerofaciens gen. nov., comb. nov.
- Improved tools for biological sequence comparison.
- Bacterial Diversity in Human Subgingival Plaque
- A simple method ("plate-in-bottle method") for the cultivation of fastidious anaerobes.
- CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
- Rumen Bacterial Community Transition During Adaptation to High-grain Diet
- Length-independent separation of DNA restriction fragments in two-dimensional gel electrophoresis.
- A new version of the RDP (Ribosomal Database Project)
- Comparison of the Oral Bacterial Flora in Saliva from a Healthy Subject and Two Periodontitis Patients by Sequence Analysis of 16S rDNA Libraries
- Colonization resistance of the digestive tract in conventional and antibiotic-treated mice
- The neighbor-joining method: a new method for reconstructing phylogenetic trees.
Cited by
- Bacterial diversity in the human gut.
- Effect of Antibiotic Therapy on Human Fecal Microbiota and the Relation to the Development of Clostridium difficile
- Gastric acid reduction leads to an alteration in lower intestinal microflora.
- Intestinal Bacteria and the Regulation of Immune Cell Homeostasis
- 腸内フローラの構造解析:16S rDNA-クローンライブラリー法
- Molecular and cultural analysis of the bacterial flora associated with brain abscesses
- Molecular requirements for the colonization of Hirudo medicinalis by Aeromonas veronii.
- Lactobacillus: host-microbe relationships.
- The commensal microbiology of the gastrointestinal tract.
- Microbiota of the alimentary tract of children - implications for allergy and inflammatory bowel disease
- Seasonal Initial Concentrations and In-Field Decay Rates of Escherichia coli and Bovine Bacteroidetes in Beef Cattle Manure
- Characterization of winter microbial communities in the purple pitcher plant (Sarracenia purpurea)
- Trimethylamine-N-oxide: A Novel Biomarker for the Identification of Inflammatory Bowel Disease
- Bacillus subtilis NA QUALIDADE DOS PINTINHOS AO NASCER, DESEMPENHO E CARACTERÍSTICAS INTESTINAIS DOS FRANGOS
- Characterization of the intestinal microbiome and lactobacilli community: influence of dietary and environmental factors
- Microbial Quality of Rainwater Harvested from Rooftops, for Domestic use and Homestead Food Gardens
- Vergleichende molekulare, epidemiologische und phylogenetische Untersuchungen zur Anpassung von Escherichia coli bei Wild- und Hausschweinen
- The role of probiotics in Helicobacter pylori infection
- Analyzing the Human Microbiome: A “How To” guide for Physicians
- Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota.
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