Rapid identification of the species of the Bacteroides fragilis group by multiplex PCR assays using group- and species-specific primers.

Keywords

Bacteroides fragilis, Biology, Multiplex polymerase chain reaction, 23S ribosomal RNA, Multiplex

References

• Bacteroides fragilis isolates compared by AP-PCR.Ana Rivero Pérez — 1999
• Anaerobic bacteria in human diseaseS. Finegold — 1977
• Human fecal flora: variation in bacterial composition within individuals and a possible effect of emotional stressLillian V. Holdeman, I. J. Good, William Moore — 1976
• DNA probes for identification of clinically important Bacteroides speciesA P Kuritza, C Getty, P Shaughnessy — 1986
• Wadsworth Anaerobic Bacteriology ManualVera L. Sutter, Diane M. Citron, Sydney M. Finegold — 1980
• Analysis of rRNA restriction fragment length polymorphisms from Bacteroides spp. and Bacteroides fragilis isolates associated with diarrhea in humans and animalsC. Jeffrey Smith, Donald R. Callihan — 1992
• Detection of Bacteroides fragilis in clinical specimens by PCRY. Yamashita, S Kohno, Hironobu Koga — 1994
• Evaluation of an automated system for identification of anaerobic bacteriaAlessandra Arzese, Rosalba Minisini, Giuseppe Botta — 1994
• Rapid identification of 11 human intestinal Lactobacillus species by multiplex PCR assays using group- and species-specific primers derived from the 16S-23S rRNA intergenic spacer region and its flanking 23S rRNA.Yuli Song, Naoki Kato, Cheng-Xu Liu — 2000
• Genetic Variation in 16S‐23S rDNA Internal Transcribed Spacer Regions and the Possible Use of This Genetic Variation for Molecular Diagnosis of Bacteroides SpeciesTomomi Kuwahara, Izumi Norimatsu, Haruyuki Nakayama — 2001
• Anaerobic infections in humans: an overview.Sydney M. Finegold — 1995
• Improved Multiplex PCR Using Conserved and Species-Specific 16S rRNA Gene Primers for Simultaneous Detection ofActinobacillus actinomycetemcomitans, Bacteroides forsythus, and Porphyromonas gingivalisSimon D. Tran, Joel Rudney — 1999
• Chromosomal restriction endonuclease analysis and ribotyping of Bacteroides fragilisHans Kleivdal, Tor Hofstad — 1995
• Detection of Bacteroides fragilis in clinical specimens by polymerase chain reaction amplification of the neuraminidase geneRavi Jotwani, Naoki Kato, Haru Kato — 1995
• The RDP (Ribosomal Database Project)B. Maidak, G. J. Olsen, N. Larsen — 1997
• Preparation of ribonucleic acid probes specific for Bacteroides fragilis.David Groves, Virginia L. Clark — 1987
• Evaluation of the BBL Crystal Anaerobe identification systemJ. J. Cavallaro, L S Wiggs, Miller Jm — 1997
• Gastrointestinal microflora studies in late-onset autism.Sydney M. Finegold, Denise Molitoris, Yuli Song — 2002
• Attributable mortality of bacteremia associated with the Bacteroides fragilis group.M. Carolyn Redondo, M. D. J. Arbo, J. Grindlinger — 1995
• Gram-positive bacteria with a high DNA G+C content are characterized by a common insertion within their 23S rRNA genes.Carsten Roller, Wolfgang Ludwig, Karl Heinz Schleifer — 1992

Cited by

• Characterization of Enterobacter Cloacae Isolated from Street Foods.Yuli Haryani, Tunung Robin, Lay Ching Chai — 2008
• Butyrylated starch increases colonic butyrate concentration but has limited effects on immunity in healthy physically active individuals.Nicholas P. West, C. Christophersen, David B. Pyne — 2013
• Development of molecular techniques to identify mealybugs (Hemiptera: Pseudococcidae) of importance on grapevine in South AfricaDavina L. Saccaggi — 2007
• Microbial, immunological, phenotypic and genetic markers of risk : aspects of Crohn's disease that are shared by unaffected siblingsC. Hedin — 2013
• Modifications iatrogènes du microbiote intestinal : impact de la chimiothérapieEmmanuel Montassier — 2014
• Responses of the gut microbiota to supplementary iron: a survey at the host-microbial interfaceG. Kortman — 2014
• RNA polymerase beta-subunit gene (rpoB) sequence analysis for the identification of Bacteroides spp.Kwan Soo Ko, T. Kuwahara, L. Haehwa — 2007
• Gut Microbiota and Atopic Manifestations in InfancyJohn Penders — 2006
• Avaliação de alguns microrganismos da microbiota intestinal endógena de crianças eutróficas com sobrepeso e obesas em idade escolar.Aline Ignacio Silvestre da Silva — 2014
• Molecular profiling of Bacteroides spp. in human feces by PCR-temperature gradient gel electrophoresis.Xiaoyan Pang, Dezhong Ding, Guifang Wei — 2005
• Assessment of the modulating effects of fructo-oligosaccharides on fecal microbiota using human flora–associated pigletsJian Shen, Baorang Zhang, Hua Wei — 2010
• Bacteroides dorei dominates gut microbiome prior to autoimmunity in Finnish children at high risk for type 1 diabetesAustin G. Davis‐Richardson, Alexandria N. Ardissone, Raquel Dias — 2014
• PCR-based diagnostics for anaerobic infections.Yuli Song — 2005
• The Effects of Maturation on the Colonic Microflora in Infancy and ChildhoodPaul Enck, Kurt Zimmermann, Kerstin Rusch — 2009
• Oral administration of heparin or heparosan increases the Lactobacillus population in gut microbiota of rats.Rongshuai Duan, Xiang’e Chen, Fengshan Wang — 2013
• Xylo-Oligosaccharides and Inulin Affect Genotoxicity and Bacterial Populations Differently in a Human Colonic Simulator Challenged with Soy ProteinC. Christophersen, Anne Petersen, Tine Rask Licht — 2013
• Safety assessment of the commensal strain Bacteroides xylanisolvens DSM 23964.Philippe Ulsemer, Kawe Toutounian, J. Schmidt — 2012
• Introducing GUt low-density array (GULDA): a validated approach for qPCR-based intestinal microbial community analysis.Anders Bergström, Tine Rask Licht, Andrea Wilcks — 2012
• Distribution, Detection of Enterotoxigenic Strains and Antimicrobial Drug Susceptibility Patterns of Bacteroides Fragilis Group in Diarrheic and Non-Diarrheic Feces from Brazilian InfantsDébora Paula Ferreira, Vânia Lúcia da Silva, Danielle A. Guimarães — 2010
• Enterotoxigenic Bacteroides fragilis: A potential instigator of colitisShervin Rabizadeh, Ki‐Jong Rhee, Shaoguang Wu — 2007

Related papers

• Differentiation of Bacteroides fragilis species by gas chromatographic detection of phenylacetic acidP. F. Van Assche — 1978
• Comparative serology of two clinical isolates of Bacteroides fragilis and Bacteroides thetaiotaomicronMarshall E. Landay, William S. Baldwin — 1979
• Use of semisolid agar from initiation of pure Bacteroides fragilis infection in miceClay Walker, T D Wilkins — 1976
• Bacteroides fragilis expresses three proteins similar to Porphyromonas gingivalis HmuY: Hemophore‐like proteins differentially evolved to participate in heme acquisition in oral and gut microbiomesS.V. Antonyuk, Klaudia Siemińska, Michał Śmiga — 2023
• Adherence of Bacteroides fragilis group speciesItzhak Brook, M. Lynn Myhal — 1991
• Properties of the penicillin-binding proteins of four species of the genus BacteroidesLaura J. V. Piddock, Robert I. Wise — 1986
• Detection of Bacteroides fragilis, Bacteroides thetaiotaomicron, and Bacteroides ovatus in clinical specimens by immunofluorescence with a monoclonal antibody to B. fragilis lipopolysaccharideMatti K. Viljanen, Linnéa Linko, O.‐P. Lehtonen — 1988
• Epidemiology of the Bacteroides fragilis group in the colonic flora in 10 patients with colonic cancer.F. Namavar, E. Theunissen, A. M. J. J. Verweij-Van Vught — 1989
• Monoclonal antibodies to Bacteroides fragilis lipopolysaccharideL Linko-Kettunen, Pertti Arstila, Markku Jalkanen — 1984
• Determination of bft Gene Subtypes in Bacteroides fragilis Clinical IsolatesMário Júlio Ávila-Campos, Chengxu Liu, Yuli Song — 2007