The Enduring Utility of Continuous Culturing in Experimental Evolution
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Summary
The comparative simplicity of the selective environment that is unique to continuous culturing provides an ideal experimental system for addressing key questions in adaptive evolution.
- Type
- review
- Published
- 2014-10-02
- Cited by
- 117
- References
- 75
- Access
- Open access
- OpenAlex
- https://openalex.org/W2038926948
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:2627100
Keywords
Biology, Directed Molecular Evolution, Experimental evolution, Simplicity, Selection (genetic algorithm)
References
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- Introduction to research with continuous cultures
- Isolation of an Escherichia coli K-12 Mutant Strain Able To Form Biofilms on Inert Surfaces: Involvement of a New ompR Allele That Increases Curli Expression
- Maintaining a healthy SPANC balance through regulatory and mutational adaptation
- Whole Genome, Whole Population Sequencing Reveals That Loss of Signaling Networks Is the Major Adaptive Strategy in a Constant Environment
- Building a Morbidostat: An automated continuous-culture device for studying bacterial drug resistance under dynamically sustained drug inhibition
- Identification of Aneuploidy-tolerating Mutations
- The use of chemostats in microbial systems biology.
- Description of the chemostat.
- Genome-Wide Detection of Polymorphisms at Nucleotide Resolution with a Single DNA Microarray
- The basis of antagonistic pleiotropy in hfq mutations that have opposite effects on fitness at slow and fast growth rates
- Mechanistic approaches to the study of evolution: the functional synthesis
- The Molecular Diversity of Adaptive Convergence
- Ex Uno Plures: Clonal Reinforcement Drives Evolution of a Simple Microbial Community
- Genome evolution and adaptation in a long-term experiment with Escherichia coli
- Logic of the Yeast Metabolic Cycle: Temporal Compartmentalization of Cellular Processes
- The Functional Basis of Adaptive Evolution in Chemostats
- Development of a novel continuous culture device for experimental evolution of bacterial populations
Cited by
- Experimental evolution of the model eukaryote Saccharomyces cerevisiae yields insight into the molecular mechanisms underlying adaptation.
- Elucidating the molecular architecture of adaptation via evolve and resequence experiments
- Experimental evolution in fungi: An untapped resource.
- Population Density Modulates Drug Inhibition and Gives Rise to Potential Bistability of Treatment Outcomes for Bacterial Infections
- Genomic evolution of bacterial populations under coselection by antibiotics and phage
- Antibiotic-Independent Adaptive Effects of Antibiotic Resistance Mutations.
- A user-friendly, low-cost turbidostat with versatile growth rate estimation based on an extended Kalman filter
- Nutrient limitation determines the fitness of cheaters in bacterial siderophore cooperation
- Enhanced Wort Fermentation with De Novo Lager Hybrids Adapted to High-Ethanol Environments
- Crystal structures reveal an elusive functional domain of pyrrolysyl-tRNA synthetase
- Proteome characterization of Escherichia coli cells evolved to tolerate elongation factor P deletion
- A generalizable experimental framework for automated cell growth and laboratory evolution
- An incoherent feedforward loop facilitates adaptive tuning of gene expression
- Evolutionary engineering of industrial microorganisms-strategies and applications
- Selecting the Best: Evolutionary Engineering of Chemical Production in Microbes
- Evolution at a high imposed mutation rate
- Precise, automated control of conditions for high-throughput growth of yeast and bacteria with eVOLVER
- Investigating the evolutionary changes in Crabtree-negative yeasts during a long-term evolution experiment : a thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Genetics at Massey University, Albany, New Zealand
- “Do It Yourself” Microbial Cultivation Techniques for Synthetic and Systems Biology: Cheap, Fun, and Flexible
- Experimental Design, Population Dynamics, and Diversity in Microbial Experimental Evolution
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