Hidden Diversity in Honey Bee Gut Symbionts Detected by Single-Cell Genomics
Explore this paper's citation graph
Summary
It is shown that, despite minimal divergence at 16S rRNA genes, in situ diversification occurs within gut communities and generates bacterial lineages with distinct ecological niches and single cell genomics has potential to elucidate processes of bacterial diversification.
- Type
- article
- Published
- 2014-09-01
- Cited by
- 150
- References
- 100
- Access
- Open access
- OpenAlex
- https://openalex.org/W2028057427
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:8563161
Keywords
Biology, Honey bee, Ribosomal RNA, Genomics, 16S ribosomal RNA
References
- Assembling the Marine Metagenome, One Cell at a Time
- Previously unrecognized stages of species-specific colonization in the mutualism between Xenorhabdus bacteria and Steinernema nematodes
- Origins of bacterial diversity through horizontal genetic transfer and adaptation to new ecological niches.
- Bacterial community structures in honeybee intestines and their response to two insecticidal proteins.
- A simple and distinctive microbiota associated with honey bees and bumble bees
- Diversity and phylotype consistency of bacteria in the guts of three bee species (Apoidea) at an oilseed rape field.
- jModelTest 2: more models, new heuristics and high-performance computing
- Recombination and Population Structure in Salmonella enterica
- Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota
- Comparative Genomics of Wolbachia and the Bacterial Species Concept
- Comprehensive phylogeny of apid bees reveals the evolutionary origins and antiquity of cleptoparasitism
- Patterns of Gene Flow Define Species of Thermophilic Archaea
- Bacterial diversity in worker adults of Apis mellifera capensis and Apis mellifera scutellata (Insecta: Hymenoptera) assessed using 16S rRNA sequences.
- Functional diversity within the simple gut microbiota of the honey bee
- Calibrating bacterial evolution.
- Diversification of the gut symbiont Lactobacillus reuteri as a result of host-driven evolution
- The mosaic genome structure of the Wolbachia wRi strain infecting Drosophila simulans
- Decontamination of MDA Reagents for Single Cell Whole Genome Amplification
- OrthoMCL: identification of ortholog groups for eukaryotic genomes.
- Inferences from whole-genome sequences of bacterial pathogens.
Cited by
- Scrambled and not-so-tiny genomes of fungal endosymbionts
- Capturing prokaryotic dark matter genomes.
- Two gut community enterotypes recur in diverse bumblebee species.
- Colony contact contributes to the diversity of gut bacteria in bumblebees (Bombus terrestris)
- From next-generation sequencing to systematic modeling of the gut microbiome
- Genomics of the honey bee microbiome
- Variation in Honey Bee Gut Microbial Diversity Affected by Ontogenetic Stage, Age and Geographic Location
- The use of evolutionary approaches to understand single cell genomes
- Extensive intra-phylotype diversity in lactobacilli and bifidobacteria from the honeybee gut
- Gut Symbionts from Distinct Hosts Exhibit Genotoxic Activity via Divergent Colibactin Biosynthesis Pathways
- Wiretapping into microbial interactions by single cell genomics
- Rearing and foraging affects bumblebee (Bombus terrestris) gut microbiota.
- Evolution of host specialization in gut microbes: the bee gut as a model
- Caste-Specific Differences in Hindgut Microbial Communities of Honey Bees (Apis mellifera)
- Re-defining microbial diversity from its single-celled building blocks
- Bartonella apis sp. nov., a honey bee gut symbiont of the class Alphaproteobacteria.
- Routes of Acquisition of the Gut Microbiota of the Honey Bee Apis mellifera
- Functionally Structured Genomes in Lactobacillus kunkeei Colonizing the Honey Crop and Food Products of Honeybees and Stingless Bees
- Engineering Microbiomes to Improve Plant and Animal Health.
- ProDeGe: a computational protocol for fully automated decontamination of genomes
Related papers
- Have ecological niches been conserved in evolutionary time for South Asian River Dolphins?
- Assessing Niche Shifts and Conservatism by Comparing the Native and Post-Invasion Niches of Major Forest Invasive Species
- Climatic niche shifts are common in introduced plants
- Studies on niche of rice whitefly Aleurocybotus indicus and its natural enemies
- Isotopic and dietary niches as indicators for resource partitioning in the gleaner bats Myotis bechsteinii, M. nattereri, and Plecotus auritus
- Population size shapes trade-off dilution and adaptation to a marginal niche unconstrained by sympatric habitual conditions
- Local Segregation of Realised Niches in Lizards
- Niche Occupation Limits Adaptive Radiation in Experimental Microcosms
- Niche conservatism in non‐native birds in Europe: niche unfilling rather than niche expansion
- Individual environmental niches in mobile organisms