SHOOT GROWTH1 Maintains Arabidopsis Epigenomes by Regulating IBM1
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Summary
The results suggest a function for SG1 in the maintenance of genome integrity by regulating IBM1 in Arabidopsis, indicating that SG1 functions antagonistically to CMT3 or KYP.
- Type
- article
- Published
- 2014-01-03
- Cited by
- 27
- References
- 30
- Access
- Open access
- OpenAlex
- https://openalex.org/W2024171394
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:463412
Keywords
Biology, Epigenetics, Chromatin, Genetics, Histone
References
- RNAi-independent de novo DNA methylation revealed in Arabidopsis mutants of chromatin remodeling gene DDM1.
- DNA methylation in an intron of the IBM1 histone demethylase gene stabilizes chromatin modification patterns
- Arabidopsis MET1 cytosine methyltransferase mutants.
- Autocatalytic differentiation of epigenetic modifications within the Arabidopsis genome
- Requirement of CHROMOMETHYLASE3 for Maintenance of CpXpG Methylation
- An Arabidopsis jmjC domain protein protects transcribed genes from DNA methylation at CHG sites
- Mechanism for full-length RNA processing of Arabidopsis genes containing intragenic heterochromatin
- Gene Transposition Causing Natural Variation for Growth in Arabidopsis thaliana
- A Polycomb-based switch underlying quantitative epigenetic memory
- The nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
- Establishing, maintaining and modifying DNA methylation patterns in plants and animals
- IBM1, a JmjC domain-containing histone demethylase, is involved in the regulation of RNA-directed DNA methylation through the epigenetic control of RDR2 and DCL3 expression in Arabidopsis
- Arabidopsis thaliana DNA methylation mutants.
- RNA-binding protein regulates plant DNA methylation by controlling mRNA processing at the intronic heterochromatin-containing gene IBM1
- Human DNA methylomes at base resolution show widespread epigenomic differences
- Control of Genic DNA Methylation by a jmjC Domain-Containing Protein in Arabidopsis thaliana
- HDA6 Directly Interacts with DNA Methyltransferase MET1 and Maintains Transposable Element Silencing in Arabidopsis1[W][OA]
- Locus-Specific Control of DNA Methylation by the Arabidopsis SUVH5 Histone Methyltransferase[W]
- Regulation of biological accuracy, precision, and memory by plant chromatin organization.
- Dual Binding of Chromomethylase Domains to H3K9me2-containing Nucleosomes Directs DNA Methylation in Plants
Cited by
- Interplay between chromatin and RNA processing.
- Epigenetic regulation of intragenic transposable elements impacts gene transcription in Arabidopsis thaliana
- DNA Methylation within Transcribed Regions
- Ammonium Inhibits Chromomethylase 3-Mediated Methylation of the Arabidopsis Nitrate Reductase Gene NIA2
- A Proposal Regarding Best Practices for Validating the Identity of Genetic Stocks and the Effects of Genetic Variants[OPEN]
- Implication de la protéine SG1 dans le maintien des épigénomes chez Arabidopsis thaliana
- DNA Methylation and Demethylation in Plant Immunity.
- An Arabidopsis Natural Epiallele Maintained by a Feed-Forward Silencing Loop between Histone and DNA
- Epigenetic Regulation of Intronic Transgenes in Arabidopsis
- A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis
- Epigenetic regulation of intragenic transposable elements: a two-edged sword
- Retrospective and perspective of plant epigenetics in China.
- Antagonistic Actions of FPA and IBM2 Regulate Transcript Processing from Genes Containing Heterochromatin1
- IBM1-dependent H3K9 demethylation enables self-silencing of an exogenous silencer for the non-cell autonomous silencing of an endogenous target gene.
- Plant tissue culture environment as a switch-key of (epi)genetic changes
- Transcriptional regulation of genes bearing intronic heterochromatin in the rice genome
- The Crosstalk Between Epigenetic Mechanisms and Alternative RNA Processing Regulation
- Immunological circuits against biotic and abiotic stresses among plants: An analytical review
- Intragenic heterochromatin‐mediated alternative polyadenylation modulates miRNA and pollen development in rice
- Long-read direct RNA sequencing reveals epigenetic regulation of chimeric gene-transposon transcripts in Arabidopsis thaliana
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