Genome sequence and analysis of the tuber crop potato
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Summary
The potato genome sequence provides a platform for genetic improvement of this vital crop and predicts 39,031 protein-coding genes and presents evidence for at least two genome duplication events indicative of a palaeopolyploid origin.
- Type
- article
- Published
- 2011-07-10
- Cited by
- 1,957
- References
- 62
- Access
- Open access
- OpenAlex
- https://openalex.org/W2012331775
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:205225262
Keywords
Crop, Biology, Genome, Sequence (biology), Whole genome sequencing
References
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- The Value of Prior Knowledge in Discovering Motifs with MEME
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- A First-Generation Haplotype Map of Maize
- Genome-wide analysis of Carica papaya reveals a small NBS resistance gene family
- Comparative sequence analysis of Solanum and Arabidopsis in a hot spot for pathogen resistance on potato chromosome V reveals a patchwork of conserved and rapidly evolving genome segments
- Control of potato tuber sprouting.
- Influence of culture medium and in vitro conditions on shoot regeneration in Solanum phureja monoploids and fertility of regenerated doubled monoploids
- EMBOSS: the European Molecular Biology Open Software Suite.
- Global distribution of the potato crop
- OrthoMCL: identification of ortholog groups for eukaryotic genomes.
- Nutrients, bioactive non-nutrients and anti-nutrients in potatoes
- Sequencing the Potato Genome: Outline and First Results to Come from the Elucidation of the Sequence of the World’s Third Most Important Food Crop
- Genome-wide identification of NBS resistance genes in Populus trichocarpa
- Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps.
- Nuclear DNA content of some important plant species
- Repbase Update, a database of eukaryotic repetitive elements
- Gene expression during tuber development in potato plants
- PRGdb: a bioinformatics platform for plant resistance gene analysis
- Members of the Kunitz-type protease inhibitor gene family of potato inhibit soluble tuber invertase in vitro
Cited by
- Modification of tomato growth by expression of truncated ERECTA protein from Arabidopsis thaliana.
- Identification and profiling of novel microRNAs in the Brassica rapa genome based on small RNA deep sequencing
- Copy number variation in potato - an asexually propagated autotetraploid species.
- Solanum resistance genes against Phytophthora infestans and their corresponding avirulence genes.
- Day length dependent restructuring of the leaf transcriptome and metabolome in potato genotypes with contrasting tuberization phenotypes.
- Managing potato wart: a review of present research status and future perspective
- Genomic architecture of potato resistance to Synchytrium endobioticum disentangled using SSR markers and the 8.3k SolCAP SNP genotyping array
- Large-Scale Evolutionary Analysis of Genes and Supergene Clusters from Terpenoid Modular Pathways Provides Insights into Metabolic Diversification in Flowering Plants
- A Revolution in Plant Metabolism: Genome-Enabled Pathway Discovery
- Characterization of the cinnamoyl-CoA reductase (CCR) gene family in Populus tomentosa reveals the enzymatic active sites and evolution of CCR
- Automated tetraploid genotype calling by hierarchical clustering
- Genetic diversity and association mapping in the Colombian Central Collection of Solanum tuberosum L. Andigenum group using SNPs markers
- Cytokinin perception in potato: new features of canonical players
- Advances in the Biology of Seed and Vegetative Storage Proteins Based on Two-Dimensional Electrophoresis Coupled to Mass Spectrometry
- Residual Heterozygosity and Epistatic Interactions Underlie the Complex Genetic Architecture of Yield in Diploid Potato
- Mining ancient microbiomes using selective enrichment of damaged DNA molecules
- Genomic DNA library preparation for resistance gene enrichment and sequencing (RenSeq) in plants.
- Method development and application of Next Generation Sequencing in forward genetics
- Genome-wide transposon analyses: annotation, movement and impact on plant function and evolution
- Molecular mapping and breeding with microsatellite markers.
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