Estimation of protein secondary structure and error analysis from circular dichroism spectra.
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Summary
The adequacy of thelinear model is investigated, paying special attention to the estimation of the error in the secondary structure estimates, and it is shown that the linear model is only adequate for the alpha-helix class.
- Type
- article
- Published
- 1990-11-15
- Cited by
- 482
- References
- 23
- OpenAlex
- https://openalex.org/W2004242436
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:18107365
Keywords
Protein secondary structure, Mathematics, Beta sheet, Circular dichroism, Spectral line
References
- Parameter estimation and hypothesis testing in linear models
- Circular dichroism and its empirical application to biopolymers.
- Computer methods for mathematical computations
- Computed circular dichroism spectra for the evaluation of protein conformation.
- Forsythe, G. E. / Malcolm, M. A. / Moler, C. B., Computer Methods for Mathematical Computations. Englewood Cliffs, New Jersey 07632. Prentice Hall, Inc., 1977. XI, 259 S
- The analysis of circular dichroism of biomolecules
- Determination of protein secondary structure in solution by vacuum ultraviolet circular dichroism.
- Variable selection method improves the prediction of protein secondary structure from circular dichroism spectra.
- Analysis of protein circular dichroism spectra for secondary structure using a simple matrix multiplication.
- Circular dichroic analysis of protein conformation: inclusion of the beta-turns.
- Automatic identification of secondary structure in globular proteins.
- Experimental errors and their effect on analyzing circular dichroism spectra of proteins.
- Estimation of globular protein secondary structure from circular dichroism.
- Secondary structure of proteins through circular dichroism spectroscopy.
- Biophysical Chemistry: Part II: Techniques for the Study of Biological Structure and Function
- Biophysical chemistry
Cited by
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- Estimation of protein secondary structure from circular dichroism spectra: comparison of CONTIN, SELCON, and CDSSTR methods with an expanded reference set.
- Folding of epidermal growth factor-like repeats from human tenascin studied through a sequence frame-shift approach.
- Purification, physicochemical characterization, saccharide specificity, and chemical modification of a Gal/GalNAc specific lectin from the seeds of Trichosanthes dioica.
- Coherent two-dimensional infrared spectroscopy: quantitative analysis of protein secondary structure in solution.
- Anionic branched surfactants as alternative denaturing agents for protein separations.
- Studies on the chitin/chitosan binding properties of six cuticular proteins analogous to peritrophin 3 from Bombyx mori
- [4] Circular dichroism
- Adsorption-Induced Changes in Enzyme Bioactivity Correlated with Adsorbed Protein Orientation and Conformation
- Evolution of pyruvate kinase in the long-term evolution experiment of Escherichia coli: A structure/function study
- Id3, inhibitor of DNA binding and cell differentiation: synthesis and conformational analysis of the full-length protein and its truncated analogues
- Study of protein in the respiratory chain by IR spectroscopy and electrochemistry
- Structural information on proteins from circular dichroism spectroscopy possibilities and limitations.
- Untersuchung zur Zellulären Pharmakologie von peptidischen und nichtpeptidischen Wirkstoffmolekülen
- Unfolded peptides and proteins studied with infrared absorption and vibrational circular dichroism spectra.
- Influence of substrate nature and β-lactoglobulin on cleanability after soiling by suspension spraying and drying
- Alpha-Synuclein And Enhanced Green Fluorescent Protein In Trifluoroethanol: Protective Factors Oppose Protein Aggregation
- Characterization of recombinant human growth hormone variants from sodium hyaluronate-based sustained release formulation of rhGH under heat stress.
- Biophysical Characterization of a Vaccine Candidate against HIV-1: The Transmembrane and Membrane Proximal Domains of HIV-1 gp41 as a Maltose Binding Protein Fusion
- The development and current state of protein circular dichroism
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