Claudin multigene family in channel catfish and their expression profiles in response to bacterial infection and hypoxia as revealed by meta-analysis of RNA-Seq datasets.
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Summary
Claudin genes were significantly down-regulated in the intestine at 3h post-infection, indicating that pathogens may disrupt the mucosal barrier by suppressing the expression of claudIn genes.
- Type
- review
- Published
- 2015-03-01
- Cited by
- 39
- References
- 65
- OpenAlex
- https://openalex.org/W1981768609
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:36744026
Keywords
Biology, Claudin, Catfish, Gene, Microarray analysis techniques
References
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- Detection of epithelial to mesenchymal transition in airways of a bleomycin induced pulmonary fibrosis model derived from an α-smooth muscle actin-Cre transgenic mouse
- Involvement of claudins in zebrafish brain ventricle morphogenesis
- Pathogen recognition receptors in channel catfish: I. Identification, phylogeny and expression of NOD-like receptors.
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- Phylogenetic revision of the claudin gene family.
- Four lysozymes (one c-type and three g-type) in catfish are drastically but differentially induced after bacterial infection.
- A new time-scale for ray-finned fish evolution
- Regulation and roles for claudin-family tight junction proteins
- Transcriptomic signatures of attachment, NF-κB suppression and IFN stimulation in the catfish gill following columnaris bacterial infection.
- Effects of cortisol, growth hormone and prolactin on gill claudin expression in Atlantic salmon.
- Tight junction proteins in zebrafish ovarian follicles: stage specific mRNA abundance and response to 17beta-estradiol, human chorionic gonadotropin, and maturation inducing hormone.
- Claudins and the modulation of tight junction permeability.
- Expression patterns of claudins, tight junction adhesion molecules, in the inner ear.
- Claudins in teleost fishes
- Structure and function of claudins.
- Protection against hypoxia-induced increase in blood-brain barrier permeability: role of tight junction proteins and NFκB
- Extensive expansion of the claudin gene family in the teleost fish, Fugu rubripes.
- Human airway epithelial tight junctions
- RNA-seq analysis of mucosal immune responses reveals signatures of intestinal barrier disruption and pathogen entry following Edwardsiella ictaluri infection in channel catfish, Ictalurus punctatus.
Cited by
- Physiology and immunology of mucosal barriers in catfish (Ictalurus spp.)
- Transcriptomic responses in the fish intestine.
- Estimation of random effects and identifying heterogeneous genes in meta-analysis of gene expression studies
- Effects of dietary protein levels on the disease resistance, immune function and physical barrier function in the gill of grass carp (Ctenopharyngodon idella) after challenged with Flavobacterium columnare.
- Transcriptome signatures in common carp spleen in response to Aeromonas hydrophila infection.
- The chemokinome superfamily in channel catfish: I. CXC subfamily and their involvement in disease defense and hypoxia responses
- Molecular mechanisms underlying active desalination and low water permeability in the esophagus of eels acclimated to seawater.
- Identification of NF‐&kgr;B related genes in channel catfish and their expression profiles in mucosal tissues after columnaris bacterial infection
- Omics in fish mucosal immunity
- A study of the damage of the intestinal mucosa barrier structure and function of Ctenopharyngodon idella with Aeromonas hydrophila
- Statistical methods for identification of NF-κB related genes and their expression profiles in channel catfish after bacterial infection
- Transcriptomic responses to environmental change in fishes: Insights from RNA sequencing
- The CC and CXC chemokine receptors in channel catfish (Ictalurus punctatus) and their involvement in disease and hypoxia responses.
- JAK and STAT members in channel catfish: Identification, phylogenetic analysis and expression profiling after Edwardsiella ictaluri infection
- Applications of transcriptomics and proteomics in understanding fish immunity
- A Review of Molecular Responses of Catfish to Bacterial Diseases and Abiotic Stresses
- The Change of Teleost Skin Commensal Microbiota Is Associated With Skin Mucosal Transcriptomic Responses During Parasitic Infection by Ichthyophthirius multifillis
- FOXO genes in channel catfish and their response after bacterial infection
- Alteration in the mRNA expression of genes associated with gastrointestinal permeability and ileal TNF-α secretion due to the exposure of silver nanoparticles in Sprague–Dawley rats
- Disruption of gut integrity and permeability contributes to enteritis in a fish-parasite model: a story told from serum metabolomics
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