GPU Acceleration of Optical Mapping Algorithm for Cardiac Electrophysiology

Keywords

Computer science, Microprocessor, Acceleration, CUDA, Computation

References

• GPU Accelerated Cardiac ElectrophysiologyFred V. Lionetti — 2010
• Real-Time Linux Dynamic Clamp: A Fast and Flexible Way to Construct Virtual Ion Channels in Living CellsAlan D. Dorval, David J. Christini, John A. White — 2001
• Acceleration of fluoro-CT reconstruction for a mobile C-arm on GPU and FPGA hardware: a simulation studyXinwei Xue, Arvi Cheryauka, D. L. Tubbs — 2006
• Ventricular Filling Slows Epicardial Conduction and Increases Action Potential Duration in an Optical Mapping Study of the Isolated Rabbit HeartDerrick Sung, Robert W. Mills, Jan Schettler — 2003
• MR image reconstruction using the GPUThomas Schiwietz, Ti‐chiun Chang, Peter Speier — 2006
• Optical mapping system with real-time control capability.Shahriar Iravanian, David J. Christini — 2007
• Nonlinear-dynamical arrhythmia control in humansDavid J. Christini, Kenneth M. Steín, Steven M. Markowitz — 2001
• Optical Mapping of Repolarization and Refractoriness From Intact HeartsIgor R. Efimov, David T. Huang, J.M. Rendt — 1994
• Accelerating Advanced MRI Reconstructions on GPUsSamuel S. Stone, Justin P. Haldar, Stephanie C. Tsao — 2008
• Biomedical image analysis on a cooperative cluster of GPUs and multicoresTimothy D. R. Hartley, Ümit V. Çatalyürek, Antonio Ruiz — 2008
• Spatiotemporal control of cardiac alternans.Blas Echebarria, Alain Karma — 2002
• The GPU on biomedical image processing for color and phenotype analysisAntonio Ruiz, Manuel Ujaldón, José A. Andrades — 2007
• A simultaneous multichannel monophasic action potential electrode array for in vivo epicardial repolarization mappingAlan V. Sahakian, Mark S. Peterson, S. Shkurovich — 2001
• A methodology for achieving high-speed rates for artificial conductance injection in electrically excitable biological cellsRobert J. Butera, C.G. Wilson, C.A. DelNegro — 2001
• Phase Shifting Prior to Spatial Filtering Enhances Optical Recordings of Cardiac Action Potential PropagationDerrick Sung, Jyotsna Somayajula-Jagai, Pamela C. Cosman — 2001
• Synchronization of ventricular fibrillation with real-time feedback pacing: implication to low-energy defibrillation.Hui‐Nam Pak, Yen‐Bin Liu, Hideki Hayashi — 2003
• Using graphics devices in reverse: GPU-based Image Processing and Computer VisionJames Fung, Steve Mann — 2008
• Accelerating Viola-Jones Face Detection to FPGA-Level Using GPUsDaniel Hefenbrock, Jason Oberg, Nhat Tan Nguyen Thanh — 2010
• Dynamic clamp: a powerful tool in cardiac electrophysiologyRonald Wilders — 2006
• High-throughput sequence alignment using Graphics Processing UnitsMichael C. Schatz, Cole Trapnell, Arthur L. Delcher — 2007

Cited by

• FPGA-GPU-CPU heterogenous architecture for real-time cardiac physiological optical mappingPingfan Meng, Matthew Jacobsen, Ryan Kastner — 2012
• A New Approach of Combining Optical Mapping Algorithm with Adaptive Kalman Filter to Achieve Fast and Early Detection of Cardiac Arrests: A Parallel ImplementationAmin Jarrah, Abedalmuhdi Almomany, Ali Basim Al-Khafaji — 2022

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