Complete Genome Sequence of Bacillus amyloliquefaciens TA208, a Strain for Industrial Production of Guanosine and Ribavirin
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Summary
Comparison of the genome sequence of Bacillus TA208 with strains DSM7 and FZB42 revealed horizontal gene transfer represented by unique prophages and restriction-modification systems and indicated significant accumulation of guanosine.
- Type
- article
- Published
- 2011-04-22
- Cited by
- 4
- References
- 16
- Access
- Open access
- OpenAlex
- https://openalex.org/W1980657895
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:261340269
Keywords
Biology, Bacillus amyloliquefaciens, Guanosine, Whole genome sequencing, Genome
References
- Prophage Finder: A Prophage Loci Prediction Tool for Prokaryotic Genome Sequences
- Application of 'next-generation' sequencing technologies to microbial genetics
- Mauve: multiple alignment of conserved genomic sequence with rearrangements.
- Rfam: annotating non-coding RNAs in complete genomes
- M.H2I, a multispecific 5C-DNA methyltransferase encoded by Bacillus amyloliquefaciens phage H2.
- Enhancing electro-transformation competency of recalcitrant Bacillus amyloliquefaciens by combining cell-wall weakening and cell-membrane fluidity disturbing.
- A small gene, designated comS, located within the coding region of the fourth amino acid‐activation domain of srfA, is required for competence development in Bacillus subtilis
- BLAST: at the core of a powerful and diverse set of sequence analysis tools
- Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria.
- Improved microbial gene identification with GLIMMER.
- Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42.
- tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
- GeneMark.hmm: new solutions for gene finding.
- Comparative analysis of the complete genome sequence of the plant growth–promoting bacterium Bacillus amyloliquefaciens FZB42
- De novo assembly of human genomes with massively parallel short read sequencing.
- Impedance-based detection of DNA sequences using a silicon transducer with PNA as the probe layer.
Cited by
- Phylogenomic analysis shows that Bacillus amyloliquefaciens subsp. plantarum is a later heterotypic synonym of Bacillus methylotrophicus.
- Genome sequences published outside of Standards in Genomic Sciences, May-June 2012
- Microbial Production of Purine Nucleotides, Nucleosides, and Nucleobases: Advances and Perspectives
- 83. Comparative Analysis of the Complete Genome Sequence of the Plant Growth-Promoting Bacterium Bacillus amyloliquefaciens FZB42
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