Bioinformatics and Gene Network Analyses of the Swine Mammary Gland Transcriptome during Late Gestation
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Summary
The DIA uncovered that Fatty acid biosynthesis, Interleukin-4 receptor binding, Galactose metabolism, and mTOR signaling were among the most-impacted pathways in sow mammary transcriptome at 80, 100, and 110 days of pregnancy.
- Type
- article
- Published
- 2013-01-01
- Cited by
- 19
- References
- 97
- Access
- Open access
- OpenAlex
- https://openalex.org/W1972874435
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:18290474
Keywords
Transcriptome, Biology, Gestation, Bioinformatics, Gene regulatory network
References
- Prenatal maturation, the timing of birth and how it may be regulated in domestic animals
- Tight Junction Regulation in the Mammary Gland
- Changes in tissue composition associated with mammary gland growth during lactation in sows.
- Composition of sow milk during lactation.
- MeCP2 binds to 5hmc enriched within active genes and accessible chromatin in the nervous system
- The relationship of changes in mammary blood flow and plasma progesterone at the time of parturition in the ewe.
- Ultrastructural changes in porcine mammary tissue during lactogenesis.
- IL-4 is an essential factor for the IgE synthesis induced in vitro by human T cell clones and their supernatants.
- Regulation of differentiation of vascular smooth muscle cells.
- HIF2α acts as an mTORC1 activator through the amino acid carrier SLC7A5.
- Effects of estrogen on the vascular system.
- Microarray gene expression analysis of porcine skeletal muscle sampled at several post mortem time points.
- Inverse relationship between connexin43 and desmin expression in cultured porcine aortic smooth muscle cells.
- New developments in mast cell biology
- Old and New Stories: Revelations from Functional Analysis of the Bovine Mammary Transcriptome during the Lactation Cycle
- Matrix Metalloproteinase-Induced Epithelial-Mesenchymal Transition in Breast Cancer
- Cell–matrix interactions during development and apoptosis of the mouse mammary gland in vivo
- Role of connexin (gap junction) genes in cell growth control and carcinogenesis.
- Changes in the composition and yield of the mammary secretion of cows during the initiation of lactation.
- An Integrated Bioinformatics Approach Identifies Elevated Cyclin E2 Expression and E2F Activity as Distinct Features of Tamoxifen Resistant Breast Tumors
Cited by
- GLUT1 and lactose synthetase are critical genes for lactose synthesis in lactating sows
- Using GO-WAR for mining cross-ontology weighted association rules
- The gestating and lactating sow
- Pathway-based genome-wide association analysis of milk coagulation properties, curd firmness, cheese yield, and curd nutrient recovery in dairy cattle.
- Genome-wide association and pathway-based analysis using latent variables related to milk protein composition and cheesemaking traits in dairy cattle.
- Screening of miRNA profiles and construction of regulation networks in early and late lactation of dairy goat mammary glands
- Multiplex genomewide association analysis of breast milk fatty acid composition extends the phenotypic association and potential selection of FADS1 variants to arachidonic acid, a critical infant micronutrient
- Transcriptional profiling of swine mammary gland during the transition from colostrogenesis to lactogenesis using RNA sequencing
- “Cell cycle process”, “cell division” and “cell proliferation” belong to ontology groups highly regulated during long–term culture of porcine oviductal epithelial cells
- Cortical Granule Distribution and Expression Pattern of Genes Regulating Cellular Component Size, Morphogenesis, and Potential to Differentiation are Related to Oocyte Developmental Competence and Maturational Capacity In Vivo and In Vitro
- Milk somatic cell derived transcriptome analysis identifies regulatory genes and pathways during lactation in Indian Sahiwal cattle (Bos indicus)
- Characterization and comparative analysis of transcriptional profiles of porcine colostrum and mature milk at different parities
- Characterization and Comparative Analysis of Transcriptional Profiles of Porcine Colostrum and Mature Milk Across Multiple Parities
- A cell transcriptomic profile provides insights into adipocytes of porcine mammary gland across development
- Local Ancestry and Selection in the Genomes of Russian Black Pied Cattle
- Proteomic analysis of Buffalo milk somatic cells reveals metabolomic and immunological transitions during early lactation
- Influence of Pregnancy on Whole-Transcriptome Sequencing in the Mammary Gland of Kazakh Mares
- Time-resolved transcriptomic profiling of mammary gland tissue during ductal morphogenesis, lactation activation, and involution in sows
- Additional file 1 of A cell transcriptomic profile provides insights into adipocytes of porcine mammary gland across development
- Additional file 1 of A cell transcriptomic profile provides insights into adipocytes of porcine mammary gland across development
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