Automated MAD and MIR structure solution

Keywords

Atom (system on chip), Computer science, Automation, Process (computing), Set (abstract data type)

References

• The Protein Data Bank: a computer-based archival file for macromolecular structures.恵子 宮北 — 1977
• MAD phasing: treatment of dispersive differences as isomorphous replacement information.Robert A. Segal — 1994
• The American Type Culture CollectionL. A. Rogers — 1925
• Taking a Structured Approach to Understanding ProteinsElizabeth Pennisi — 1998
• [27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.Eric de La Fortelle, G. Bricogne — 1997
• [25] Overview of isomorphous replacement phasing.Hengming Ke — 1997
• [28] Phase determination from multiwavelength anomalous diffraction measurements.Wayne A. Hendrickson, Craig M. Ogata — 1997
• PHASES-95: a program package for processing and analyzing diffraction data from macromolecules.William Furey, S. Swaminathan — 1997
• Structure of the gene V protein of bacteriophage f1 determined by multiwavelength x-ray diffraction on the selenomethionyl protein.Matthew M. Skinner, Hong Zhang, D.H. Leschnitzer — 1993
• The CCP4 suite: programs for protein crystallography.Number Collaborative Computational Project — 1994
• Improved methods for building protein models in electron density maps and the location of errors in these models.T. Alwyn Jones, Jin-yu Zou, Sandra W. Cowan — 1991
• Towards the automatic interpretation of macromolecular electron-density maps: qualitative and quantitative matching of protein sequence to map.J.-Y. Zou, T. Alwyn Jones — 1996
• SnB: crystal structure determination via shake-and-bakeRuss Miller, Steven M. Gallo, H. G. Khalak — 1994
• Three-Dimensional Structure of the Armadillo Repeat Region of β-CateninAndrew H. Huber, W. James Nelson, William I. Weis — 1997
• Determination of Absolute from Relative X-Ray Intensity DataA. J. C. Wilson — 1942
• The Argonne Structural Genomics Workshop: Lamaze class for the birth of a new science.Lawrence Shapiro, Christopher D. Lima — 1998
• Bayesian correlated MAD phasing.Thomas C. Terwilliger, Joel Berendzen — 1997
• Structure at 2.8 Â resolution of F1-ATPase from bovine heart mitochondriaJan Pieter Abrahams, Andrew G. W. Leslie, René Lutter — 1994
• Class‐directed structure determination: Foundation for a protein structure initiativeThomas C. Terwilliger, Geoffrey S. Waldo, Thomas S. Peat — 1998
• Marrying structure and genomics.Burkhard Rost — 1998

Cited by

• A detailed view of a ribosomal active site: the structure of the L11-RNA complex.Wissam Jaber, David R. Holmes — 1999
• Crystal structure and functional dissection of the cytostatic cytokine oncostatin M.岩雄 岩崎, 慶男 宮坂, 篁 井口 — 2000
• Crystal structure of an intracellular protease from Pyrococcus horikoshii at 2-A resolution.麻弓 久保田, 清和 南 — 2000
• Structure of the RGS-like domain from PDZ-RhoGEF: linking heterotrimeric g protein-coupled signaling to Rho GTPases.Харусь Ольга Анатольевна — 2001
• The structural basis of localization and signaling by the focal adhesion targeting domain.Claudio Sartea — 2002
• Structure of HI1333 (YhbY), a putative RNA‐binding protein from Haemophilus influenzaeGeorge E. Lent — 2002
• Mechanism of ubiquitin recognition by the CUE domain of Vps9p.益夫 長谷川 — 2003
• A 1.7A structure of Fve, a member of the new fungal immunomodulatory protein family.José Ignacio Rodríguez — 2003
• Structural framework of fructosyl transfer in Bacillus subtilis levansucraseTeodoro López Rodríguez, Gonzalo Aranda Pérez — 2003
• Structure of a delivery protein for an AAA+ protease in complex with a peptide degradation tag.S. D. Akbarov, T. Kepçeler, M. Mert Egilmez — 2003
• Crystal structure of the extracellular protein secretion NTPase EpsE of Vibrio cholerae.Réal Lussier, Élaine Bégin — 2003
• Model of the brain tumor-Pumilio translation repressor complex.Stephen Se, Michael Brady — 2003
• Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima and Mechanism of Product Chain Length Determination*M. N Reddy, Kôichi KANNA, Ch. Srinivasa Rao — 2004
• The structure of chorismate synthase reveals a novel flavin binding site fundamental to a unique chemical reaction.Andrew P. French, Theodore Edward Uehling, Howard Wettstein — 2003
• Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin.W. B. Hanson, Rafael Omar de Jesús, Donald B. Rosenfield — 2004
• Structural implications for heavy metal‐induced reversible assembly and aggregation of a protein: the case of Pyrococcus horikoshii CutA 1Alberto Gil Novales — 2004
• A Novel NAD-binding Protein Revealed by the Crystal Structure of 2,3-Diketo-l-gulonate Reductase (YiaK)*F. Forouhar, Insun Lee, Jordi Benach — 2004
• Structure of a lipid droplet protein; the PAT family member TIP47.Sabrina J. Hickenbottom, Alan R. Kimmel, Constantine Londos — 2004
• Crystal structure of the bacterial nucleoside transporter TsxJavier Armendáriz Martija — 2004
• The X-ray structure of an antiparallel dimer of the human amyloid precursor protein E2 domain.Muratbek Azymbakiev — 2004

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