A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains
Explore this paper's citation graph
Summary
RNA FISH analyses suggest that these noncoding RNAs function in mRNA metabolism as they demonstrate an intimate association of these RNA species with SC35 nuclear speckles in both human and mouse cells.
- Type
- article
- Published
- 2007-02-01
- Cited by
- 985
- References
- 47
- Access
- Open access
- OpenAlex
- https://openalex.org/W1879996757
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:7756160
Keywords
Biology, XIST, Long non-coding RNA, RNA, Small nucleolar RNA
References
- Coordination of the random asynchronous replication of autosomal loci
- X-chromosome inactivation: counting, choice and initiation
- Non-coding RNA.
- Compartmentalization of specific pre-mRNA metabolism: an emerging view.
- An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region.
- Chromatin architecture and nuclear RNA.
- The X chromosome is organized into a gene-rich outer rim and an internal core containing silenced nongenic sequences
- A revision of the human XIST gene organization and structural comparison with mouse Xist
- Heterogeneous nuclear RNA-protein fibers in chromatin-depleted nuclei
- Nuclear speckles: a model for nuclear organelles
- A simple, rapid technique for precise mapping of multiple sequences in two colors using a single optical filter set.
- In vivo BiFC analysis of Y14 and NXF1 mRNA export complexes: preferential localization within and around SC35 domains
- Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
- A conserved noncoding intronic transcript at the mouse Dnm3 locus.
- Comparative analysis of noncoding regions of 77 orthologous mouse and human gene pairs.
- A three-dimensional view of precursor messenger RNA metabolism within the mammalian nucleus.
- The role of chromosomal RNAs in marking the X for dosage compensation.
- XIST RNA paints the inactive X chromosome at interphase: evidence for a novel RNA involved in nuclear/chromosome structure
- Employment opportunities for non‐coding RNAs
- Probing functional organization within the nucleus: is genome structure integrated with RNA metabolism?
Cited by
- When one is better than two: RNA with dual functions.
- MALAT1 promotes the proliferation and metastasis of gallbladder cancer cells by activating the ERK/MAPK pathway
- Temporal and spatial regulation of translation in the mammalian oocyte via the mTOR–eIF4F pathway
- The first murine zygotic transcription is promiscuous and uncoupled from splicing and 3′ processing
- Altered Long Noncoding RNA Expression Precedes the Course of Parkinson’s Disease—a Preliminary Report
- Functions of long noncoding RNAs in the nucleus
- mRNA changes in nucleus accumbens related to methamphetamine addiction in mice
- Decoding Noncoding RNAs: Role of MicroRNAs and Long Noncoding RNAs in Ocular Neovascularization
- Viral lncRNA: A regulatory molecule for controlling virus life cycle
- LncRNA MALAT1 Depressed Chemo-Sensitivity of NSCLC Cells through Directly Functioning on miR-197-3p/p120 Catenin Axis
- RETRACTED ARTICLE: Downregulation of NEAT1 reverses the radioactive iodine resistance of papillary thyroid carcinoma cell via miR-101-3p/FN1/PI3K-AKT signaling pathway
- Defining the regulation and function of SAFB1 and SAFB2 in human breast cancer cells
- Long noncoding RNAs: Re-writing dogmas of RNA processing and stability
- Analysis of the intracellular localisation and alternatively spliced isoforms of splicing factor 1
- Lessons from reverse-genetic studies of lncRNAs.
- Downregulation of long noncoding RNA MALAT1 induces epithelial-to-mesenchymal transition via the PI3K-AKT pathway in breast cancer.
- Long noncoding RNAs in TDP-43 and FUS/TLS-related frontotemporal lobar degeneration (FTLD).
- Unravelling the RNA-Binding Properties of SAFB Proteins in Breast Cancer Cells
- Mammalian comparative genomics and epigenomics
- Methods in and applications of the sequencing of short non-coding RNAs
Related papers
- Yeast snoRNA accumulation relies on a cleavage‐dependent/polyadenylation‐independent 3′‐processing apparatus
- Long non-coding RNA XIST promotes hepatocellular carcinoma progression by sponging miR-200b-3p.
- Long noncoding RNA XIST expedites metastasis and modulates epithelial–mesenchymal transition in colorectal cancer
- Long noncoding RNA XIST acts as a competing endogenous RNA to promote malignant melanoma growth and metastasis by sponging miR-217.
- Long non-coding RNA XIST functions as an oncogene in human colorectal cancer by targeting miR-132-3p.
- Functional Analysis of Yeast snoRNA and snRNA 3′-End Formation Mediated by Uncoupling of Cleavage and Polyadenylation
- Long non-coding RNA XIST promotes cell growth and invasion through regulating miR-497/MACC1 axis in gastric cancer
- Long Noncoding RNAs in Metabolic Syndrome Related Disorders
- Imprinted noncoding RNAs
- Interaction between N6-methyladenosine (m6A) modification and noncoding RNAs in cancer